Vsoil pools version 2022-08-02

description: To model the fate of water applied to a crop canopy. Intended to account for water storage on leaves, water redistribution to soil, water evaporation from canopy and to modify the climatic demand applied to the crop.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

crop leaf area index, m2.m-2, none,single
rain intensity, m.s-1, none,single
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
vegetation cover evaporation volumetric flux density, m3.m-2.s-1, surface,single
vegetation type, NA, none,single, >0

outputs: (name, unit, location, [vector], [constraint])

below canopy water volumetric flux density, m.s-1, surface,single
below canopy water volumetric flux density daily cumulated, m3.m-2, none,single
vegetation cover rain interception amount yearly, m, none,single, none
vegetation cover rain interception rate, m3.m-2.s-1, none,single, none
vegetation cover rain interception rate time cumulated, m3.m-2, none,single, none
vegetation cover water height, m3.m-2, surface,single

process: chemical dispersion-coagulation

description: The effect of soil solution composition on the dispersion or coagulation of clay.

category: geochemical processes

inputs: (name, unit, location, [vector], [constraint])

soil bulk density, kg.m-3, profile,single, >=0
soil cec, mol+.kg-1, profile,tagged_array, >=0
soil clay exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil clay minerals mass percentage, %, profile,tagged_array, >=0
soil clay volumetric percentage, %, profile,single, >=0
soil exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil grain size class number per layer, number.m-2, profile,tagged_array, >=0
soil hydraulic, NA, none,single
soil minerals mass ratio, kg.kg-1, profile,tagged_array, >=0
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil organic carbon volumetric percentage, %, profile,single, >=0
soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil particles mass percentage, %, profile,tagged_array, >=0
soil particles surfacic mass, kg.m-2, profile,tagged_array, >=0
soil pore volume per volume, m3.m-3, profile,single
soil saturated water volumetric content, m3.m-3, profile,single, >0
soil solution pH, -, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil clay exchangeable cations release rate due to chemical dispersion, mol+.m-3.s-1, profile,tagged_array, none
soil clay in solution concentration change due to chemical dispersion, kg.m-3.s-1, profile,single, none
soil grain size class number per layer change due to chemical dispersion, number.m-2, profile,tagged_array, >=0
soil particles mass change due to chemical dispersion, kg.m-2, profile,tagged_array, >=0
soil particles mass change due to chemical dispersion time cumulated, kg.m-2, profile,tagged_array, >=0

process: chemical weathering of primary minerals

description: Explains the weathering flux of Ca, Mg, K and Na from Anorthite, Chlorite, Microcline and Albite in soil solution.

category: geochemical processes

inputs: (name, unit, location, [vector], [constraint])

soil bottom water volumetric content, m3.m-3, bottom,single
soil bulk density, kg.m-3, profile,single, >=0
soil gibbsite moles per compartment, mol.m-2, profile,single, >=0
soil gibbsite moles per unit mass, mol.kg-1, profile,single, >=0
soil immobile water volumetric content, m3.m-3, profile,single
soil minerals mass ratio, kg.kg-1, profile,tagged_array, >=0
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil mobile water volumetric content, m3.m-3, profile,single
soil solution pH, -, profile,single, >=0
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single
soil weathering pools charge concentration change due to bioturbation, mol+.kg-1, profile,tagged_array, >=0
soil weathering pools charge concentration change due to plowing, mol+.kg-1, profile,tagged_array, >=0

outputs: (name, unit, location, [vector], [constraint])

soil gibbsite moles per unit mass rate of change due to chemical weathering, mol.kg-1.s-1, profile,single, none
soil mobile solution concentration change due to chemical weathering, mol.m-3, profile,tagged_array, >=0
soil mobile solution rate of concentration change due to chemical weathering, mol.m-3.s-1, profile,tagged_array, none
soil weathering pools cations flux profile time cumulated, mol.m-2, none,tagged_array, >=0
soil weathering pools cations flux time cumulated, mol.m-3, profile,tagged_array, >=0
soil weathering pools charge concentration, mol+.kg-1, profile,tagged_array, >=0

process: climate

description: To supply meteorological information usually provided by meteorological services.

category: external factors

inputs: none

outputs: (name, unit, location, [vector], [constraint])

air water relative humidity, %, none,single
air water relative humidity daily average, %, none,single
air water relative humidity daily maximum, %, none,single
air water relative humidity daily minimum, %, none,single
air water relative humidity duration above 80 percent daily cumulated, s, none,single
air water relative humidity duration above 80 percent hourly cumulated, s, none,single
air water relative humidity duration above 90 percent daily cumulated, s, none,single
air water relative humidity duration above 90 percent hourly cumulated, s, none,single
air water relative humidity duration below 40 percent daily cumulated, s, none,single
air water vapour pressure, Pa, surface,single
atmosphere air at 10 cm above the soil surface temperature maximum, K, none,single, >=0
atmosphere air at 10 cm above the soil surface temperature minimum, K, none,single, >=0
atmosphere air at 50 cm above the soil surface temperature, K, none,single, >=0
atmosphere air at 50 cm above the soil surface temperature maximum, K, none,single, >=0
atmosphere air at 50 cm above the soil surface temperature minimum, K, none,single, >=0
atmosphere air pressure hourly, Pa, none,single
atmosphere air specific humidity, kg.kg-1, none,single, >=0
atmosphere air temperature, K, none,single, >=0
atmosphere air temperature daily amplitude, K, none,single, >=0
atmosphere air temperature daily average, K, none,single, >=0
atmosphere air temperature daily maximum, K, none,single, >=0
atmosphere air temperature daily minimum, K, none,single, >=0
atmosphere incident longwave radiation energy flux density, W.m-2, none,single
atmosphere incident photosynthetically active radiation energy flux daily cumulated, J.m-2, none,single
atmosphere incident photosynthetically active radiation energy flux hourly, J.m-2, none,single
atmosphere incident shortwave radiation energy flux daily cumulated, J.m-2, surface,single
atmosphere incident shortwave radiation energy flux density, W.m-2, none,single
atmosphere incident shortwave radiation energy flux hourly cumulated, J.m-2, surface,single
atmosphere sunshine duration calculated daily cumulated, s, none,single
atmosphere sunshine duration measured daily cumulated, s, none,single
atmosphere sunshine duration measured hourly, s, none,single
atmosphere wind direction, rad, none,single
atmosphere wind speed daily average, m.s-1, none,single
atmosphere wind speed daily maximum, m.s-1, none,single
atmosphere wind speed hourly average, m.s-1, none,single
atmosphere wind speed hourly maximum, m.s-1, none,single
atmosphere wind velocity, m.s-1, none,single
crop evapotranspiration volumetric flux density lysimeter daily cumulated, m3.m-2, none,single
crop maximum evapotranspiration volumetric flux density Penman daily cumulated, m3.m-2, surface,single, none
earth geographic coordinate latitude, rad, none,single, >0
leaf wetting duration daily cumulated, s, none,single
leaf wetting duration hourly, s, none,single
rain colloids mass concentration, kg.m-3, none,tagged_array, >=0
rain height cumulated, m3.m-2, none,single, >=0
rain height daily cumulated, m3.m-2, none,single
rain height hourly, m3.m-2, none,single
rain height monthly, m3.m-2, none,single, none
rain height yearly, m3.m-2, none,single, none
rain intensity, m.s-1, none,single
rain intensity maximum, m.s-1, none,single
rain solutes mass concentration, kg.m-3, surface,tagged_array, >=0
rain solutes molar concentration, mol.m-3, surface,tagged_array
rain solutes molar concentration time cumulated, mol.m-3, none,tagged_array, >=0
soil at 10 cm depth temperature maximum, K, none,single, >=0
soil at 10 cm depth temperature minimum, K, none,single, >=0
soil at 50 cm depth temperature average, K, none,single, >=0
soil surface maximum evaporation volumetric flux density pan daily cumulated, m3.m-2, surface,single

process: complexation

description: To simulate the biological degradation of molecules in the soil solution and eventually sorbed on the solid phase.

category: geochemical processes

inputs: (name, unit, location, [vector], [constraint])

soil immobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil immobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil immobile water volumetric content, m3.m-3, profile,single
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil mobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil mobile water volumetric content, m3.m-3, profile,single
soil temperature, K, profile,single, >=0

outputs: (name, unit, location, [vector], [constraint])

soil immobile solution solutes molar complexation rate, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution solutes molar complexation rate, mol.m-3.s-1, profile,tagged_array, none

process: crop development

description: To simulate crop growth (leaf area index, rooting profile, dry matter, solute demands, etc...)

category: biological processes

inputs: (name, unit, location, [vector], [constraint])

atmosphere air temperature daily average, K, none,single, >=0
atmosphere incident shortwave radiation energy flux daily cumulated, J.m-2, surface,single
crop maximum evapotranspiration volumetric flux density Penman, m3.m-2.s-1, none,single
crop root solutes mass uptake rate profile time cumulated, kg.m-2, none,tagged_array, >=0
crop transpiration volumetric flux density, m3.m-2.s-1, none,single
soil root solutes molar uptake rate, mol.m-3.s-1, profile,tagged_array
soil unfrozen depth, m, none,single, >=0

outputs: (name, unit, location, [vector], [constraint])

crop above ground parts surfacic mass, kg.m-2, none,single, >=0
crop canopy height, m, none,single
crop cultural coefficient, NA, none,single, none
crop dead leaf area index, m2.m-2, none,single
crop green leaf area index, m2.m-2, none,single
crop leaf area index, m2.m-2, none,single
crop leaf area index maximum, m2.m-2, none,single, >=0
crop maximum solutes uptake mass flux density, kg.m-2.s-1, none,tagged_array, >=0
crop maximum solutes uptake molar flux density, mol.m-2.s-1, none,tagged_array
crop nitrogen nutrition index, NA, none,single, none
crop residues organic matter pools carbon surfacic mass, kg.m-2, surface,tagged_array, >=0
crop residues organic matter pools carbon to dry matter mass ratio, kg.kg-1, surface,tagged_array, >=0
crop residues organic matter pools incorporation depth, m, none,single
crop residues organic matter pools nitrogen to carbon mass ratio, kg.kg-1, surface,tagged_array, >=0
crop root density normalized, ratio0-1, profile,single, ratio0-1
crop root front depth, m, none,single, >=0
crop root front depth yearly maximum, m, none,single, none
crop root length, m, none,single
crop root length density, m.m-3, profile,single
crop root length density cell, m.m-3, profile,single
crop root mass concentration, kg.m-3, profile,single, >=0
crop root solutes maximum mass uptake rate time cumulated, kg.m-2, none,tagged_array, >=0
plant litter surfacic mass, kg.m-2, none,single, >=0
plant litter surfacic mass time cumulated, kg.m-2, none,single, >=0
soil surface covered fraction, m2.m-2, surface,single, ratio0-1
vegetation type, NA, none,single, >0

process: crop pesticides fate

description: To model volatilization of compounds from the crop leaves.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

atmosphere incident shortwave radiation energy flux daily cumulated, J.m-2, surface,single
atmosphere incident shortwave radiation energy flux density, W.m-2, none,single
atmosphere incident shortwave radiation energy flux hourly cumulated, J.m-2, surface,single
crop canopy aerodynamic resistance, s.m-1, surface,single
crop leaf area index, m2.m-2, none,single
crop leaf temperature, K, none,single, >=0
rain intensity, m.s-1, none,single
soil gas molar concentration, mol.m-3, profile,tagged_array, >=0
soil gas molar fraction, mol.mol-1, profile,tagged_array, ratio0-1
soil gas partial pressure, Pa, profile,tagged_array, >=0
soil surface temperature, K, surface,single, >=0

outputs: (name, unit, location, [vector], [constraint])

soil surface gas volatilization flux, kg.m-2.s-1, surface,tagged_array, none

process: denitrification

description: To model denitrification and associated gaseous productions and consumptions.

category: biological processes

inputs: (name, unit, location, [vector], [constraint])

soil aggregates size class proportion, ratio0-1, profile,tagged_array, ratio0-1
soil aggregates sizes, m, none,tagged_array
soil bulk density, kg.m-3, profile,single, >=0
soil gas consumption rate, mol.m-3.s-1, profile,tagged_array, none
soil gas molar concentration, mol.m-3, profile,tagged_array, >=0
soil immobile water volumetric content, m3.m-3, profile,single
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil organic matter gas consumption rate, mol.m-3.s-1, profile,tagged_array
soil organic matter solutes consumption rate, mol.m-3.s-1, profile,tagged_array, none
soil pore volume per volume, m3.m-3, profile,single
soil saturation index, ratio0-1, profile,single, ratio0-1
soil structural pore volume per volume, m3.m-3, profile,single
soil temperature, K, profile,single, >=0
soil textural pore volume per volume, m3.m-3, profile,single
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil denitrification gas consumption rate, mol.m-3.s-1, profile,tagged_array, none
soil denitrification gas production rate, mol.m-3.s-1, profile,tagged_array, none
soil solution denitrification rate, mol.m-3.s-1, profile,single
soil solution denitrification rate profile cumulated, kg.m-2.s-1, none,single

process: erosion

description: Describes the removal of soil from the top layes and its effect on soil properties.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

crop root length density, m.m-3, profile,single
soil bulk density, kg.m-3, profile,single, >=0
soil cec, mol+.kg-1, profile,tagged_array, >=0
soil clay exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil electrical conductivity, S.m-1, profile,single, none
soil exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil gas molar concentration, mol.m-3, profile,tagged_array, >=0
soil grain size class number per layer, number.m-2, profile,tagged_array, >=0
soil minerals mass ratio, kg.kg-1, profile,tagged_array, >=0
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil organic carbon exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil organic carbon mass ratio, kg.kg-1, profile,single, >=0
soil organic matter biomass pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter dpm pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter humus pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter inert pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter pools C14labelled mass, kg.m-2, profile,tagged_array, >=0
soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil organic matter rpm pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil particles mass percentage, %, profile,tagged_array, >=0
soil pore volume per volume, m3.m-3, profile,single
soil solution pH, -, profile,single, >=0
soil temperature, K, profile,single, >=0
soil water accumulated deficit, m, profile,single,
soil water matrix potential, m(H2O), profile,single
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single
soil weathering pools charge concentration, mol+.kg-1, profile,tagged_array, >=0

outputs: (name, unit, location, [vector], [constraint])

soil carbon activities C14 change due to erosion, NA, profile,tagged_array, none
soil eroded thickness, m, surface,single, >=0
soil organic matter pools change due to erosion, kg.kg-1, profile,tagged_array, >=0

process: evapotranspiration

description: To calculate crop evapotranspiration demand.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

air water relative humidity, %, none,single
air water relative humidity daily average, %, none,single
air water vapour pressure, Pa, surface,single
atmosphere air specific humidity, kg.kg-1, none,single, >=0
atmosphere air temperature, K, none,single, >=0
atmosphere air temperature daily amplitude, K, none,single, >=0
atmosphere air temperature daily average, K, none,single, >=0
atmosphere air temperature daily maximum, K, none,single, >=0
atmosphere air temperature daily minimum, K, none,single, >=0
atmosphere incident longwave radiation energy flux density, W.m-2, none,single
atmosphere incident photosynthetically active radiation energy flux daily cumulated, J.m-2, none,single
atmosphere incident photosynthetically active radiation energy flux hourly, J.m-2, none,single
atmosphere incident shortwave radiation energy flux daily cumulated, J.m-2, surface,single
atmosphere incident shortwave radiation energy flux density, W.m-2, none,single
atmosphere incident shortwave radiation energy flux hourly cumulated, J.m-2, surface,single
atmosphere sunshine duration calculated daily cumulated, s, none,single
atmosphere sunshine duration measured daily cumulated, s, none,single
atmosphere sunshine duration measured hourly, s, none,single
atmosphere wind direction, rad, none,single
atmosphere wind speed daily average, m.s-1, none,single
atmosphere wind speed daily maximum, m.s-1, none,single
atmosphere wind speed hourly average, m.s-1, none,single
atmosphere wind speed hourly maximum, m.s-1, none,single
atmosphere wind velocity, m.s-1, none,single
crop maximum evapotranspiration volumetric flux density Penman daily cumulated, m3.m-2, surface,single, none

outputs: (name, unit, location, [vector], [constraint])

crop evapotranspiration volumetric flux density time cumulated, m3.m-2, surface,single
crop maximum evapotranspiration volumetric flux density Penman, m3.m-2.s-1, none,single
crop maximum evapotranspiration volumetric flux density daily cumulated, m3.m-2, none,single
crop maximum evapotranspiration volumetric flux density monthly, m3.m-2, none,single, >=0
crop maximum evapotranspiration volumetric flux density yearly, m3.m-2, none,single, none

process: flood irrigation

description: To provide irrigation amounts and concentrations for flooding irrigations.

category: external factors

inputs: none

outputs: (name, unit, location, [vector], [constraint])

soil surface flooding irrigation solutes molar concentration, mol.m-3, surface,tagged_array
soil surface flooding irrigation water height, m, surface,single

process: gas transport and balance

description: To model gaseous transport in the soil profile.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

atmosphere air gas molar concentration, mol.m-3, surface,tagged_array
atmosphere air gas molar fraction, mol.mol-1, none,tagged_array, ratio0-1
atmosphere air pressure, Pa, surface,single
organic matter gas consumption rate, mol.m-3.s-1, profile,tagged_array, none
organic matter gas production rate, mol.m-3.s-1, profile,tagged_array, none
soil air gas sink source rate due to aqueous gaseous exchanges, mol.m-3.s-1, profile,tagged_array, none
soil air volumetric content, m3.m-3, profile,single, none
soil bioturbation depth, m, none,single, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil denitrification gas consumption rate, mol.m-3.s-1, profile,tagged_array, none
soil denitrification gas production rate, mol.m-3.s-1, profile,tagged_array, none
soil hydraulic, NA, none,single
soil organic matter gas consumption rate, mol.m-3.s-1, profile,tagged_array
soil organic matter gas production rate, mol.m-3.s-1, profile,tagged_array
soil pore volume per volume, m3.m-3, profile,single
soil solution volatilization rate, mol.m-3.s-1, profile,tagged_array
soil structural pore volume per volume, m3.m-3, profile,single
soil surface gas volatilization flux, kg.m-2.s-1, surface,tagged_array, none
soil temperature, K, profile,single, >=0
soil textural pore volume per volume, m3.m-3, profile,single
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil air pressure, Pa, profile,single, none
soil air volumetric flux density, m3.m-2.s-1, profile,single
soil gas consumption rate, mol.m-3.s-1, profile,tagged_array, none
soil gas molar concentration, mol.m-3, profile,tagged_array, >=0
soil gas molar flux, mol.m-2.s-1, profile,tagged_array, none
soil gas molar fraction, mol.mol-1, profile,tagged_array, ratio0-1
soil gas partial pressure, Pa, profile,tagged_array, >=0
soil gas production rate, mol.m-3.s-1, profile,tagged_array, >=0

process: geochemistry

description: To model geochemical processes in the soil solution and at the interface solid-water.

category: geochemical processes

inputs: (name, unit, location, [vector], [constraint])

rain solutes molar concentration, mol.m-3, surface,tagged_array
soil bulk density, kg.m-3, profile,single, >=0
soil cec, mol+.kg-1, profile,tagged_array, >=0
soil exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil gas molar concentration, mol.m-3, profile,tagged_array, >=0
soil gas molar fraction, mol.mol-1, profile,tagged_array, ratio0-1
soil gas partial pressure, Pa, profile,tagged_array, >=0
soil gibbsite moles per compartment, mol.m-2, profile,single, >=0
soil gibbsite moles per unit mass, mol.kg-1, profile,single, >=0
soil minerals mass ratio, kg.kg-1, profile,tagged_array, >=0
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil electrical conductivity, S.m-1, profile,single, none
soil exchangeable cations charge concentration change due to geochemistry, mol+.kg-1, profile,tagged_array, >=0
soil gibbsite moles per unit mass change due to geochemistry, mol.kg-1, profile,single, >=0
soil minerals mass ratio change due to geochemistry, kg.kg-1, profile,tagged_array, >=0
soil mobile solution concentration change due to geochemistry, mol.m-3, profile,tagged_array, >=0
soil mobile solution solutes molar sink due to geochemistry, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution solutes molar source due to geochemistry, mol.m-3.s-1, profile,tagged_array, none
soil solution ionic strength, mol.m-3, profile,single, >=0
soil solution pE, V, profile,single
soil solution pH, -, profile,single, >=0
soil solution sink source geochemistry, mol.m-3.s-1, profile,tagged_array
soil water osmotic potential, m, profile,single, none

process: heat transport and balance

description: To model heat transport and balance in the soil profile.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

atmosphere air temperature, K, none,single, >=0
atmosphere incident shortwave radiation energy flux daily cumulated, J.m-2, surface,single
root water volumetric uptake rate, m3.m-3.s-1, profile,single
soil bottom heat energy flux density, W.m-2, bottom,single
soil bottom temperature, K, bottom,single, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil hydraulic, NA, none,single
soil organic carbon volumetric percentage, %, profile,single, >=0
soil particles volumetric percentage, %, profile,tagged_array, >=0
soil pore volume per volume, m3.m-3, profile,single
soil saturation index, ratio0-1, profile,single, ratio0-1
soil solid bulk density, kg.m-3, profile,single, >=0
soil surface conductive heat energy flux density, W.m-2, surface,single
soil surface temperature, K, surface,single, >=0
soil water matrix potential, m(H2O), profile,single
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil heat energy flux density, W.m-2, profile,single
soil surface albedo, ratio0-1, surface,single, ratio0-1
soil surface conductive heat energy flux time cumulated, J.m-2, surface,single
soil temperature, K, profile,single, >=0
soil thermal conductivity, W.m-1.K-1, profile,single, >=0
soil unfrozen depth, m, none,single, >=0

process: mineral fertilization

description: Provides mineral fertilization -schedule and amounts- at soil surface

category: external factors

inputs: none

outputs: (name, unit, location, [vector], [constraint])

soil mineral fertilization surfacic mass, kg.m-2, surface,tagged_array, >=0

process: molecules degradation

description: Simulate degradation of molecules in the soil profile.

category: geochemical processes

inputs: (name, unit, location, [vector], [constraint])

soil bulk density, kg.m-3, profile,single, >=0
soil immobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil immobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil immobile solution solutes sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil immobile solution sorbed solutes molar concentration, mol.kg-1, profile,tagged_array, >=0
soil immobile water volumetric content, m3.m-3, profile,single
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil mobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil mobile solution solutes sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil mobile solution sorbed solutes molar concentration, mol.kg-1, profile,tagged_array, >=0
soil mobile water volumetric content, m3.m-3, profile,single
soil organic carbon mass ratio, kg.kg-1, profile,single, >=0
soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil pah strongly sorbed, kg.kg-1, profile,tagged_array, >=0
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil temperature, K, profile,single, >=0
soil water matrix potential, m(H2O), profile,single
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

C_CO2 pah metabolites production rate, kg.kg-1.s-1, profile,single, >=0
C_CO2 pah production rate, kg.kg-1.s-1, profile,single
C_CO2 pah production rate by cometabolism, kg.kg-1.s-1, profile,single, >=0
C_CO2 pah production rate by specific biomass, kg.kg-1.s-1, profile,single, >=0
C_CO2 pah production rate profile cumulated, kg.m-2.s-1, none,single
C_CO2 pah production rate profile time cumulated, kg.m-2, none,single
soil immobile solution hydrolysis rate, mol.m-3.s-1, profile,tagged_array, >=0
soil immobile solution solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil immobile solution sorbed solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution hydrolysis rate, mol.m-3.s-1, profile,tagged_array, >=0
soil mobile solution solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution solutes degradation rate profile cumulated, mol.m-2.s-1, none,tagged_array
soil mobile solution solutes degradation rate profile time cumulated, mol.m-2, none,tagged_array
soil mobile solution sorbed solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil pah metabolites mass concentration, kg.kg-1, profile,tagged_array, >=0
soil pah metabolites mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil pah non extractible mass concentration, kg.kg-1, profile,tagged_array, >=0
soil pah non extractible mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil pah residues biological bound, kg.kg-1, profile,tagged_array, >=0
soil pah residues biological bound profile cumulated, kg.m-2, none,tagged_array, >=0
soil solution degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil solution degradation rate profile cumulated, mol.m-2.s-1, none,tagged_array, none
soil solution degradation rate profile time cumulated, mol.m-2, none,tagged_array, >=0
soil solution hydrolysis rate profile cumulated, mol.m-2.s-1, none,tagged_array, none
soil solution hydrolysis rate profile time cumulated, mol.m-2, none,tagged_array, >=0
soil solution solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil solution solutes degradation rate profile cumulated, mol.m-2.s-1, none,tagged_array, none
soil solution solutes degradation rate profile time cumulated, kg.m-2, none,tagged_array, >=0
soil sorbed solutes degradation rate profile cumulated, mol.m-2.s-1, none,tagged_array, none
soil sorbed solutes degradation rate profile time cumulated, mol.m-2, none,tagged_array, >=0
soil specific microbial biomass mass ratio, kg.kg-1, profile,tagged_array, >=0
soil specific microbial biomass mass ratio profile cumulated, kg.m-2, none,tagged_array, >=0

process: mulch dynamics

description: To model the changes in mass, volume and soil coverage of a mulch in interaction with the soil profile.

category: biological processes

inputs: (name, unit, location, [vector], [constraint])

atmosphere air temperature daily average, K, none,single, >=0
crop residues organic matter pools carbon surfacic mass, kg.m-2, surface,tagged_array, >=0
crop residues organic matter pools carbon to dry matter mass ratio, kg.kg-1, surface,tagged_array, >=0
crop residues organic matter pools incorporation depth, m, none,single
crop residues organic matter pools nitrogen to carbon mass ratio, kg.kg-1, surface,tagged_array, >=0
crop root solutes molar uptake rate daily cumulated, mol.m-3, profile,tagged_array, >=0
mulch organic matter biomass pool associated elements concentration change due to bioturbation, mol.kg-1, none,tagged_array, >=0
mulch organic matter dpm pool associated elements concentration change due to bioturbation, mol.kg-1, none,tagged_array, >=0
mulch organic matter humus pool associated elements concentration change due to bioturbation, mol.kg-1, none,tagged_array, >=0
mulch organic matter inert pool associated elements concentration change due to bioturbation, mol.kg-1, none,tagged_array, >=0
mulch organic matter rpm pool associated elements concentration change due to bioturbation, mol.kg-1, none,tagged_array, >=0
mulch water volumetric content, m3.m-3, surface,single
mulch with soil contact leaching rate, mol.kg-1.s-1, surface,tagged_array, none
mulch with soil contact organic matter pools C14labelled mass change due to bioturbation, kg.m-2, none,tagged_array, >=0
mulch with soil contact organic matter pools C14labelled mass change due to plowing, kg.m-2, none,tagged_array, >=0
mulch with soil contact organic matter pools C14labelled mass change due to slash, kg.m-2, none,tagged_array, >=0
mulch with soil contact organic matter pools weight change due to bioturbation, kg.m-2, none,tagged_array, >=0
mulch with soil contact organic matter pools weight change due to plowing, kg.m-2, none,tagged_array, >=0
mulch with soil contact organic matter pools weight change due to slash and burn, kg.m-2, none,tagged_array, >=0
mulch with soil contact temperature, K, surface,single, >=0
mulch with soil contact water pressure, m(H2O), surface,single
mulch with soil contact water volumetric content, m3.m-3, surface,single
mulch without soil contact leaching rate, mol.kg-1.s-1, surface,tagged_array, none
mulch without soil contact temperature, K, surface,single, >=0
mulch without soil contact water pressure, m(H2O), surface,single
mulch without soil contact water volumetric content, m3.m-3, surface,single
organic matter manure surfacic mass, kg.m-2, none,single, >=0
plant litter surfacic mass, kg.m-2, none,single, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil mulch temperature, K, surface,single, >=0
soil organic fertilizer incorporation depth, m, none,single, >=0
soil organic fertilizer pools carbon mass ratio, kg.kg-1, surface,tagged_array, >=0
soil organic fertilizer pools nitrogen to carbon mass ratio, kg.kg-1, surface,tagged_array, >=0
soil organic fertilizer pools surfacic mass, kg.m-2, surface,tagged_array, >=0
soil organic matter pools C13 isotopic excess, NA, profile,tagged_array, none
soil organic matter pools N15 isotopic excess, NA, profile,tagged_array
soil organic matter pools NCratio, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil surface covered fraction, m2.m-2, surface,single, ratio0-1
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single
vegetation type, NA, none,single, >0

outputs: (name, unit, location, [vector], [constraint])

mulch C_CO2 production rate time cumulated, kg.m-2, surface,single, >=0
mulch bulk density, kg.m-3, surface,single, >=0
mulch input mass time cumulated, kg.m-2, none,single, >=0
mulch organic matter biomass pool associated elements quantities, mol.m-2, none,tagged_array, >=0
mulch organic matter dpm pool associated elements quantities, mol.m-2, none,tagged_array, >=0
mulch organic matter humus pool associated elements quantities, mol.m-2, none,tagged_array, >=0
mulch organic matter inert pool associated elements quantities, mol.m-2, none,tagged_array, >=0
mulch organic matter rpm pool associated elements quantities, mol.m-2, none,tagged_array, >=0
mulch volume, m3.m-2, surface,single
mulch with soil contact C_CO2 production rate time cumulated, kg.m-2, none,single, >=0
mulch with soil contact area index, m2.m-2, surface,single
mulch with soil contact biomass amount, kg.m-2, surface,single, >=0
mulch with soil contact biomass pool depth, m, surface,single, none
mulch with soil contact carbon surfacic mass, kg.m-2, surface,single, >=0
mulch with soil contact decomposition solutes sink, kg.m-3.s-1, profile,tagged_array, none
mulch with soil contact decomposition solutes source, kg.m-3.s-1, profile,tagged_array, none
mulch with soil contact gas production rate, mol.m-2.s-1, none,tagged_array, none
mulch with soil contact gas production rate time cumulated, mol.m-2, surface,tagged_array, >=0
mulch with soil contact organic matter pools C14labelled mass, kg.m-2, surface,tagged_array, >=0
mulch with soil contact organic matter pools NCratio, kg.kg-1, surface,tagged_array, >=0
mulch with soil contact organic matter pools carbon mass ratio, kg.kg-1, surface,tagged_array, >=0
mulch with soil contact organic matter pools decomposition rate temperature factor, -, none,single, >=0
mulch with soil contact organic matter pools water soluble ratio, ratio0-1, surface,tagged_array, ratio0-1
mulch with soil contact organic matter pools weight, kg.m-2, surface,tagged_array, >=0
mulch with soil contact retting biomass amount, kg.m-2, none,tagged_array, >=0
mulch with soil contact solutes amount, kg.m-2, surface,tagged_array, >=0
mulch with soil contact solutes mass concentration, kg.kg-1, surface,tagged_array, >=0
mulch with soil contact surfacic mass, kg.m-2, surface,single, >=0
mulch with soil contact thickness, m, surface,single, none
mulch with soil contact volume, m3.m-2, surface,single
mulch without soil contact C_CO2 production rate time cumulated, kg.m-2, none,single, >=0
mulch without soil contact area index, m2.m-2, surface,single
mulch without soil contact carbon surfacic mass, kg.m-2, surface,single, >=0
mulch without soil contact gas production rate, mol.m-2.s-1, none,tagged_array, >=0
mulch without soil contact gas production rate time cumulated, mol.m-2, none,tagged_array
mulch without soil contact organic matter pools NCratio, kg.kg-1, surface,tagged_array, >=0
mulch without soil contact organic matter pools carbon mass ratio, kg.kg-1, surface,tagged_array, >=0
mulch without soil contact organic matter pools water soluble ratio, ratio0-1, surface,tagged_array, ratio0-1
mulch without soil contact organic matter pools weight, kg.m-2, surface,tagged_array, >=0
mulch without soil contact retting biomass amount, kg.m-2, none,tagged_array, >=0
mulch without soil contact solutes amount, kg.m-2, surface,tagged_array, >=0
mulch without soil contact solutes mass concentration, kg.kg-1, surface,tagged_array, >=0
mulch without soil contact surfacic mass, kg.m-2, surface,single, >=0
mulch without soil contact volume, m3.m-2, surface,single
soil organic matter pools mass ratio rate of change due to mulch decomposition, kg.kg-1.s-1, profile,tagged_array
soil organic matter pools mass ratio rate of change due to mulch decomposition profile time cumulated, kg.m-2, none,tagged_array, >=0

process: mulch heat transfer

description: To model heat balance and temperature of a mulch in interaction with climate and soil.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

atmosphere air temperature, K, none,single, >=0
crop temperature, K, surface,single, >=0
mulch bulk density, kg.m-3, surface,single, >=0
mulch with soil contact evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch with soil contact maximum evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch with soil contact thickness, m, surface,single, none
mulch with soil contact volume, m3.m-2, surface,single
mulch with soil contact water volumetric content, m3.m-3, surface,single
mulch without soil contact evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch without soil contact maximum evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch without soil contact volume, m3.m-2, surface,single
mulch without soil contact water volumetric content, m3.m-3, surface,single
soil temperature, K, profile,single, >=0

outputs: (name, unit, location, [vector], [constraint])

atmosphere mulch without soil contact radiative heat flux density, W.m-2, surface,single, none
mulch with soil contact heating energy flux density, W.m-2, surface,single, none
mulch with soil contact mulch without soil contact radiative heat flux density, W.m-2, surface,single, none
mulch with soil contact temperature, K, surface,single, >=0
mulch without soil contact heating energy flux density, W.m-2, surface,single, none
mulch without soil contact temperature, K, surface,single, >=0
soil surface mulch with soil contact conductive heat exchange, W.m-2, surface,single, none

process: mulch solutes leaching

description: To model the leaching of solutes contained in a mulch.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

mulch water volumetric content, m3.m-3, surface,single
mulch with soil contact solutes mass concentration, kg.kg-1, surface,tagged_array, >=0
mulch with soil contact surfacic mass, kg.m-2, surface,single, >=0
mulch with soil contact water saturation index, NA, surface,single, none
mulch without soil contact solutes mass concentration, kg.kg-1, surface,tagged_array, >=0
mulch without soil contact surfacic mass, kg.m-2, surface,single, >=0
mulch without soil contact water saturation index, ratio0-1, surface,single, ratio0-1
mulch without soil contact water volumetric content, m3.m-3, surface,single
rain solutes molar concentration, mol.m-3, surface,tagged_array
soil surface sprinkling irrigation solutes molar concentration, mol.m-3, surface,tagged_array
soil surface water volumetric flux density, m.s-1, surface,single

outputs: (name, unit, location, [vector], [constraint])

mulch no contact leachate solutes molar concentration, mol.m-3, surface,tagged_array
mulch with soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
mulch with soil contact leaching rate, mol.kg-1.s-1, surface,tagged_array, none
mulch without soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
mulch without soil contact leaching rate, mol.kg-1.s-1, surface,tagged_array, none
soil mulch contact leachate solutes molar concentration, mol.m-3, surface,tagged_array

process: mulch water transfer

description: Water balance of a mulch in interaction with climate and soil.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

below canopy water volumetric flux density, m.s-1, surface,single
below vegetation maximum evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch volume, m3.m-2, surface,single
mulch with soil contact area index, m2.m-2, surface,single
mulch with soil contact surfacic mass, kg.m-2, surface,single, >=0
mulch with soil contact volume, m3.m-2, surface,single
mulch without soil contact area index, m2.m-2, surface,single
mulch without soil contact surfacic mass, kg.m-2, surface,single, >=0
mulch without soil contact volume, m3.m-2, surface,single
soil hydraulic, NA, none,single
soil water matrix potential, m(H2O), profile,single

outputs: (name, unit, location, [vector], [constraint])

mulch evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch evaporation volumetric flux density daily, kg, surface,single, >=0
mulch evaporation volumetric flux density time cumulated, m3.m-2, surface,single, none
mulch maximum evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch maximum evaporation volumetric flux density time cumulated, m3.m-2, surface,single, none
mulch rain flux density evaporation, m.s-1, surface,single, >=0
mulch rain flux density evaporation time cumulated, m, surface,single, >=0
mulch water volumetric content, m3.m-3, surface,single
mulch with soil contact evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch with soil contact evaporation volumetric flux density time cumulated, m3.m-2, none,single, none
mulch with soil contact maximum evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch with soil contact maximum evaporation volumetric flux density time cumulated, m3.m-2, surface,single, none
mulch with soil contact rain interception volumetric flux density, m3.m-2.s-1, surface,single, >=0
mulch with soil contact rain interception volumetric flux density time cumulated, m3.m-2, surface,single, >=0
mulch with soil contact water amount, m3.m-2, none,single, >=0
mulch with soil contact water pressure, m(H2O), surface,single
mulch with soil contact water saturation index, NA, surface,single, none
mulch with soil contact water volumetric content, m3.m-3, surface,single
mulch without soil contact evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch without soil contact evaporation volumetric flux density time cumulated, m3.m-2, none,single, none
mulch without soil contact maximum evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch without soil contact maximum evaporation volumetric flux density time cumulated, m3.m-2, surface,single, none
mulch without soil contact rain interception volumetric flux density, m3.m-2.s-1, surface,single, >=0
mulch without soil contact rain interception volumetric flux density time cumulated, m3.m-2, surface,single, >=0
mulch without soil contact water amount, m3.m-2, none,single, >=0
mulch without soil contact water pressure, m(H2O), surface,single
mulch without soil contact water saturation index, ratio0-1, surface,single, ratio0-1
mulch without soil contact water volumetric content, m3.m-3, surface,single
soil mulch water volumetric flux density, m.s-1, surface,single
soil mulch water volumetric flux density time cumulated, m, surface,single, none
soil surface maximum evaporation volumetric flux density, m3.m-2.s-1, surface,single
soil surface maximum evaporation volumetric flux density time cumulated, m3.m-2, surface,single, none
soil surface water volumetric flux density, m.s-1, surface,single
soil surface water volumetric flux density time cumulated, m3.m-2, surface,single, none

process: organic fertilization

description: To provide organic fertilization amounts, composition and schedule.

category: external factors

inputs: none

outputs: (name, unit, location, [vector], [constraint])

organic matter manure surfacic mass, kg.m-2, none,single, >=0
organic matter manure surfacic mass time cumulated, kg.m-2, none,single, >=0
soil organic fertilizer incorporation depth, m, none,single, >=0
soil organic fertilizer pah surfacic mass, kg.m-2, surface,tagged_array, >=0
soil organic fertilizer pah surfacic mass time cumulated, kg.m-2, surface,tagged_array, >=0
soil organic fertilizer pools carbon mass ratio, kg.kg-1, surface,tagged_array, >=0
soil organic fertilizer pools nitrogen to carbon mass ratio, kg.kg-1, surface,tagged_array, >=0
soil organic fertilizer pools surfacic mass, kg.m-2, surface,tagged_array, >=0
soil organic fertilizer pools surfacic mass time cumulated, kg.m-2, none,tagged_array, >=0
soil organic fertilizer pools water soluble fraction, ratio0-1, surface,tagged_array, ratio0-1

process: organic matter dynamics

description: To model organic matter transformations in soil profile.

category: biological processes

inputs: (name, unit, location, [vector], [constraint])

crop maximum evapotranspiration volumetric flux density monthly, m3.m-2, none,single, >=0
crop root density normalized, ratio0-1, profile,single, ratio0-1
crop root front depth yearly maximum, m, none,single, none
crop root solutes molar uptake rate daily cumulated, mol.m-3, profile,tagged_array, >=0
mulch with soil contact decomposition solutes sink, kg.m-3.s-1, profile,tagged_array, none
mulch with soil contact decomposition solutes source, kg.m-3.s-1, profile,tagged_array, none
organic matter manure surfacic mass, kg.m-2, none,single, >=0
plant litter surfacic mass, kg.m-2, none,single, >=0
rain height daily cumulated, m3.m-2, none,single
rain height monthly, m3.m-2, none,single, none
soil air volumetric content, m3.m-3, profile,single, none
soil bulk density, kg.m-3, profile,single, >=0
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil organic carbon mass percentage, %, profile,single, >=0
soil organic fertilizer incorporation depth, m, none,single, >=0
soil organic fertilizer pools carbon mass ratio, kg.kg-1, surface,tagged_array, >=0
soil organic fertilizer pools nitrogen to carbon mass ratio, kg.kg-1, surface,tagged_array, >=0
soil organic fertilizer pools surfacic mass, kg.m-2, surface,tagged_array, >=0
soil organic matter biomass pool associated elements concentration change due to bioturbation, mol.m-3, profile,tagged_array
soil organic matter biomass pool associated elements concentration change due to plowing, mol.m-3, profile,tagged_array, >=0
soil organic matter dpm pool associated elements concentration change due to bioturbation, mol.m-3, profile,tagged_array, >=0
soil organic matter dpm pool associated elements concentration change due to plowing, mol.m-3, profile,tagged_array, >=0
soil organic matter humus pool associated elements concentration change due to bioturbation, mol.m-3, profile,tagged_array
soil organic matter humus pool associated elements concentration change due to plowing, mol.m-3, profile,tagged_array, >=0
soil organic matter inert pool associated elements concentration change due to bioturbation, mol.m-3, profile,tagged_array, >=0
soil organic matter inert pool associated elements concentration change due to plowing, mol.m-3, profile,tagged_array, >=0
soil organic matter pools C14labelled mass change due to bioturbation, kg.m-2, profile,tagged_array
soil organic matter pools C14labelled mass change due to plowing, kg.m-2, profile,tagged_array, >=0
soil organic matter pools C14labelled mass change due to slash and burn, kg.m-2, profile,tagged_array, >=0
soil organic matter pools C14labelled mass ratio change due to deposition, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools change due to deposition, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools change due to erosion, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools mass change due to bioturbation, kg.m-2, profile,tagged_array
soil organic matter pools mass change due to plowing, kg.m-2, profile,tagged_array, >=0
soil organic matter pools mass change due to slash and burn, kg.m-2, profile,tagged_array, >=0
soil organic matter pools mass ratio rate of change due to mulch decomposition, kg.kg-1.s-1, profile,tagged_array
soil organic matter rpm pool associated elements concentration change due to bioturbation, mol.m-3, profile,tagged_array, >=0
soil organic matter rpm pool associated elements concentration change due to plowing, mol.m-3, profile,tagged_array, >=0
soil particles mass percentage, %, profile,tagged_array, >=0
soil pore volume per volume, m3.m-3, profile,single
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil surface covered fraction, m2.m-2, surface,single, ratio0-1
soil temperature, K, profile,single, >=0
soil water matrix potential, m(H2O), profile,single
soil water volumetric content, m3.m-3, profile,single
vegetation type, NA, none,single, >0

outputs: (name, unit, location, [vector], [constraint])

C_CO2 organic matter pools production rate time cumulated, kg.kg-1, none,single, >=0
organic matter gas consumption rate, mol.m-3.s-1, profile,tagged_array, none
organic matter gas production rate, mol.m-3.s-1, profile,tagged_array, none
organic matter gas production rate profile cumulated, mol.m-2.s-1, none,tagged_array, >=0
organic matter gas production rate profile time cumulated, mol.m-2, none,tagged_array, >=0
soil carbon humification rate, kg.m-3.s-1, profile,single
soil carbon humification rate profile cumulated, kg.m-2.s-1, none,single
soil carbon humification rate profile time cumulated, kg.m-2, none,single
soil nitrification rate, kg.m-3.s-1, profile,single, none
soil nitrification rate profile cumulated, kg.m-2.s-1, none,single, none
soil nitrification rate profile time cumulated, kg.m-2, none,single, >=0
soil nitrogen humification rate, kg.m-3.s-1, profile,single, none
soil nitrogen humification rate profile cumulated, kg.m-2.s-1, none,single, none
soil nitrogen humification rate profile time cumulated, kg.m-2, none,single, >=0
soil nitrogen immobilization rate, kg.m-3.s-1, profile,single, none
soil nitrogen immobilization rate profile cumulated, kg.m-2.s-1, none,single, none
soil nitrogen immobilization rate profile time cumulated, kg.m-2, none,single, >=0
soil organic matter biomass pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter biomass pool associated elements concentration profile cumulated, mol.m-2, none,tagged_array, >=0
soil organic matter dpm pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter dpm pool associated elements concentration profile cumulated, mol.m-2, none,tagged_array, >=0
soil organic matter gas consumption rate profile cumulated, mol.m-2.s-1, none,tagged_array, none
soil organic matter gas consumption rate profile time cumulated, mol.m-2, none,tagged_array, >=0
soil organic matter humus pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter humus pool associated elements concentration profile cumulated, mol.m-2, none,tagged_array, >=0
soil organic matter inert pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter pools C13 isotopic excess, NA, profile,tagged_array, none
soil organic matter pools C13 mass ratio, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools C14labelled mass, kg.m-2, profile,tagged_array, >=0
soil organic matter pools C14labelled mass ratio, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools N15 isotopic excess, NA, profile,tagged_array
soil organic matter pools N15 mass ratio, kg.kg-1, profile,tagged_array
soil organic matter pools NCratio, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools carbon mass ratio profile cumulated, kg.m-2, none,tagged_array, >=0
soil organic matter pools decomposition rate, kg.kg-1.s-1, profile,tagged_array
soil organic matter pools decomposition rate temperature factor daily average, NA, profile,single, none
soil organic matter pools decomposition rate water factor daily average, NA, profile,single, >=0
soil organic matter pools input mass time cumulated, kg.m-2, none,single, >=0
soil organic matter pools mass in compartment, kg.m-2, profile,tagged_array, >=0
soil organic matter pools net mineral nitrogen flux, kg.kg-1.s-1, profile,single
soil organic matter pools net mineral nitrogen flux time cumulated, kg.kg-1, profile,single
soil organic matter pools nitrogen mass ratio, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools nitrogen mass ratio profile cumulated, kg.m-2, none,tagged_array, >=0
soil organic matter rpm pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter rpm pool associated elements concentration profile cumulated, mol.m-2, none,tagged_array, >=0
soil organic matter solutes consumption rate, mol.m-3.s-1, profile,tagged_array, none
soil organic matter solutes consumption rate profile cumulated, kg.m-2.s-1, none,tagged_array
soil organic matter solutes consumption rate profile time cumulated, kg.m-2, none,tagged_array
soil organic matter solutes production rate, mol.m-3.s-1, profile,tagged_array, none
soil organic matter solutes production rate profile cumulated, mol.m-2.s-1, none,tagged_array, >=0
soil organic matter solutes production rate profile time cumulated, mol.m-2, none,tagged_array, >=0
soil organic nitrogen mineralization rate, kg.m-3.s-1, profile,single, none
soil organic nitrogen mineralization rate profile cumulated, kg.m-2.s-1, none,single
soil organic nitrogen mineralization rate profile time cumulated, kg.m-2, none,single
soil temperature daily average, K, profile,single, >=0
soil water accumulated deficit, m, profile,single,
soil water accumulated deficit profile cumulated, m, none,single,
soil water accumulated deficit profile cumulated maximum, m, none,single,

process: organic pollutant compost

description: Simulate exchange of organic pollutants (HAP fo example) between compost and soil solution.

category: geochemical processes

inputs: (name, unit, location, [vector], [constraint])

soil bulk density, kg.m-3, profile,single, >=0
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil organic fertilizer incorporation depth, m, none,single, >=0
soil organic fertilizer pah surfacic mass, kg.m-2, surface,tagged_array, >=0
soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools decomposition rate, kg.kg-1.s-1, profile,tagged_array
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

compost pah desorption rate, kg.kg-1.s-1, profile,tagged_array
compost pah mass concentration, kg.kg-1, profile,tagged_array, >=0
compost pah mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil pah compost to mobile solution exchange rate, kg.m-3.s-1, profile,tagged_array
soil pah compost to mobile solution exchange rate profile cumulated, kg.m-2.s-1, none,tagged_array
soil pah compost to mobile solution exchange rate profile time cumulated, kg.m-2, none,tagged_array, >=0
soil pah compost to solution exchange rate, kg.m-3.s-1, profile,tagged_array, none
soil pah compost to solution exchange rate profile cumulated, kg.m-2.s-1, none,tagged_array, none
soil pah compost to solution exchange rate profile time cumulated, kg.m-2, none,tagged_array, >=0
soil pah compost to strong sorption sites exchange rate, kg.kg-1.s-1, profile,tagged_array
soil pah compost to strong sorption sites exchange rate profile cumulated, kg.m-2.s-1, none,tagged_array
soil pah compost to strong sorption sites exchange rate profile time cumulated, kg.m-2, none,tagged_array
soil pah mass concentration, kg.kg-1, profile,tagged_array, >=0

process: organic pollutant sorption

description: Adsorption of HAP and more generally of organic pollutants (OP) on soil solid phase.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

compost pah mass concentration, kg.kg-1, profile,tagged_array, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil mobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil mobile water volumetric content, m3.m-3, profile,single
soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil pah strongly sorbed, kg.kg-1, profile,tagged_array, >=0
soil pah weakly sorbed, kg.kg-1, profile,tagged_array, >=0
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil mobile solution organic pollutant sink, mol.m-3.s-1, profile,tagged_array, >=0
soil mobile solution organic pollutant sink profile cumulated, mol.m-2.s-1, none,tagged_array
soil mobile solution organic pollutant sink profile time cumulated, mol.m-2, none,tagged_array, >=0
soil mobile solution organic pollutant source, mol.m-3.s-1, profile,tagged_array
soil mobile solution organic pollutant source profile cumulated, kg.m-2.s-1, none,tagged_array
soil mobile solution organic pollutant source profile time cumulated, kg.m-2, none,tagged_array
soil pah weak sites to strong sites exchange rate, kg.kg-1.s-1, profile,tagged_array
soil solution organic pollutant desorption rate, kg.m-3.s-1, profile,tagged_array, >=0
soil solution organic pollutant desorption rate profile cumulated, kg.m-2.s-1, none,tagged_array, >=0
soil solution organic pollutant desorption rate profile time cumulated, kg.m-2, none,tagged_array, >=0
soil solution organic pollutant sorption rate, kg.m-3.s-1, profile,tagged_array, >=0
soil solution organic pollutant sorption rate profile cumulated, kg.m-2.s-1, none,tagged_array, >=0
soil solution organic pollutant sorption rate profile time cumulated, kg.m-2, none,tagged_array, >=0

process: particles and colloids mobilization

description: To account for particles and colloids mobilization or detachment. Mobilization of particles can have several origins 'chemical, physical) that are all accounted for in this process. Particle and colloid transport is accounted for by the "particles and colloids transport" process.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

soil mobile solution strongly sorbed colloids mass concentration, kg.kg-1, profile,tagged_array, >=0
soil mobile solution weakly sorbed colloids mass concentration, kg.kg-1, profile,tagged_array, >=0
soil solution strongly sorbed colloids mass concentration, kg.kg-1, profile,tagged_array, >=0
soil solution weakly sorbed colloids mass concentration, kg.kg-1, profile,tagged_array, >=0

outputs: (name, unit, location, [vector], [constraint])

soil mobile solution strongly sorbed colloids desorption rate, kg.kg-1.s-1, profile,tagged_array, none
soil mobile solution weakly sorbed colloids desorption rate, kg.kg-1.s-1, profile,tagged_array, none
soil solution strongly sorbed colloids desorption rate, kg.kg-1.s-1, profile,tagged_array, >=0
soil solution weakly sorbed colloids desorption rate, kg.kg-1.s-1, profile,tagged_array, >=0

process: particles and colloids retention

description: To account for retention of particles and colloids in the soil profile. Retention can have several origins (deposition, filtering, etc...) that are all accounted for in this process. Transport of particles and colloids is accounted for by the "Particle and colloid transport" process.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

soil bulk density, kg.m-3, profile,single, >=0
soil colloids mobile water concentration, kg.m-3, profile,tagged_array, >=0
soil mobile water volumetric content, m3.m-3, profile,single
soil solution colloids mass concentration, kg.m-3, profile,tagged_array, >=0
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil mobile solution strongly sorbed colloids sorption rate, kg.kg-1.s-1, profile,tagged_array, none
soil mobile solution weakly sorbed colloids sorption rate, kg.kg-1.s-1, profile,tagged_array, none
soil solution strongly sorbed colloids sorption rate, kg.kg-1.s-1, profile,tagged_array, >=0
soil solution weakly sorbed colloids sorption rate, kg.kg-1.s-1, profile,tagged_array, >=0

process: particles and colloids transport

description: This process accounts for colloids and particles transport by the liquid phase.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

rain colloids mass concentration, kg.m-3, none,tagged_array, >=0
rain intensity, m.s-1, none,single
soil bulk density, kg.m-3, profile,single, >=0
soil clay exchangeable cations release rate due to chemical dispersion, mol+.m-3.s-1, profile,tagged_array, none
soil clay exchangeable cations release rate due to splash, mol+.m-2.s-1, surface,tagged_array, none
soil clay in solution concentration change due to chemical dispersion, kg.m-3.s-1, profile,single, none
soil mobile solution strongly sorbed colloids desorption rate, kg.kg-1.s-1, profile,tagged_array, none
soil mobile solution strongly sorbed colloids sorption rate, kg.kg-1.s-1, profile,tagged_array, none
soil mobile solution weakly sorbed colloids desorption rate, kg.kg-1.s-1, profile,tagged_array, none
soil mobile solution weakly sorbed colloids sorption rate, kg.kg-1.s-1, profile,tagged_array, none
soil mobile water volumetric content, m3.m-3, profile,single
soil pore volume per volume, m3.m-3, profile,single
soil solution strongly sorbed colloids desorption rate, kg.kg-1.s-1, profile,tagged_array, >=0
soil solution strongly sorbed colloids sorption rate, kg.kg-1.s-1, profile,tagged_array, >=0
soil solution weakly sorbed colloids desorption rate, kg.kg-1.s-1, profile,tagged_array, >=0
soil solution weakly sorbed colloids sorption rate, kg.kg-1.s-1, profile,tagged_array, >=0
soil surface clay splash dispersion rate, kg.m-2.s-1, surface,single, >=0
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
soil surface water volumetric flux density, m.s-1, surface,single
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single
sprinkling irrigation colloids mass concentration, kg.m-3, none,tagged_array, >=0

outputs: (name, unit, location, [vector], [constraint])

soil bottom colloids mass flux, kg.m-2.s-1, bottom,tagged_array, none
soil bottom colloids mass flux time cumulated, kg.m-2, bottom,tagged_array, >=0
soil clay exchangeable cations charges amount filtering rate, mol+.m-3.s-1, profile,tagged_array, >=0
soil clay exchangeable cations charges amount filtering rate time cumulated, mol+.m-3, profile,tagged_array, >=0
soil clay in solution filtering rate, kg.m-3.s-1, profile,single, none
soil clay in solution filtering rate time cumulated, kg.m-3, profile,single, >=0
soil clay in solution mass concentration, kg.m-3, profile,single, >=0
soil clay in solution mass concentration profile cumulated, kg.m-2, none,single, >=0
soil colloids deposited amount, kg, none,tagged_array, >=0
soil colloids mobile water concentration, kg.m-3, profile,tagged_array, >=0
soil colloids mobile water concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil mobile solution strongly sorbed colloids mass concentration, kg.kg-1, profile,tagged_array, >=0
soil mobile solution strongly sorbed colloids mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil mobile solution weakly sorbed colloids mass concentration, kg.kg-1, profile,tagged_array, >=0
soil mobile solution weakly sorbed colloids mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil solution clay exchangeable cations charge concentration, mol+.m-3, profile,tagged_array, >=0
soil solution clay exchangeable cations charge concentration profile cumulated, mol+.m-2, none,tagged_array, >=0
soil solution colloids mass concentration, kg.m-3, profile,tagged_array, >=0
soil solution colloids mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil solution strongly sorbed colloids mass concentration, kg.kg-1, profile,tagged_array, >=0
soil solution strongly sorbed colloids mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil solution weakly sorbed colloids mass concentration, kg.kg-1, profile,tagged_array, >=0
soil solution weakly sorbed colloids mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil surface water layer colloids exchange rate, kg.m-2.s-1, surface,tagged_array, none
soil surface water layer colloids exchange rate time cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer colloids mass concentration, kg.m-3, surface,tagged_array, >=0

process: physical weathering

description: Describes the breakage of soil particles due to strain caused by temperature gradients. The consequence of this process is an increase in clay fraction of soil.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

soil grain size class number per layer, number.m-2, profile,tagged_array, >=0
soil particles surfacic mass, kg.m-2, profile,tagged_array, >=0
soil temperature, K, profile,single, >=0

outputs: (name, unit, location, [vector], [constraint])

soil grain size class number per layer change due to physical weathering, number.m-2, profile,tagged_array, >=0
soil grain size class number per layer change due to physical weathering cumulated, number.m-2, profile,tagged_array, >=0
soil grain size class number per layer change due to physical weathering daily cumulated, number.m-2, profile,tagged_array, >=0
soil grain size class number per layer change due to physical weathering yearly, number.m-2, profile,tagged_array, >=0

process: physico-chemical equilibrium

description: To describe the physico-chemical equilibrium between liquid, gaseous and solid phases.

category: geochemical processes

inputs: (name, unit, location, [vector], [constraint])

soil bulk density, kg.m-3, profile,single, >=0
soil gas molar concentration, mol.m-3, profile,tagged_array, >=0
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil organic carbon mass ratio, kg.kg-1, profile,single, >=0
soil pore volume per volume, m3.m-3, profile,single
soil solution ionic strength, mol.m-3, profile,single, >=0
soil solution pH, -, profile,single, >=0
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil air gas sink source rate due to aqueous gaseous exchanges, mol.m-3.s-1, profile,tagged_array, none
soil air gas sink source rate due to aqueous gaseous exchanges profile time cumulated, mol.m-2, none,tagged_array, >=0
soil mobile solution sink source rate due to aqueous gaseous exchanges, mol.m-3.s-1, profile,tagged_array, none
soil solution sorbed solutes sink source rate due to aqueous gaseous exchanges, mol.kg-1.s-1, profile,tagged_array, none

process: preferential water flow

description: Accounts for water flow and water balance in the soil macroporosity

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

soil hydraulic, NA, none,single
soil surface runoff height, m, surface,single
soil surface water volumetric flux density, m.s-1, surface,single
soil water height, m3.m-2, none,single
soil water matrix potential, m(H2O), profile,single
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil bottom macropores water volumetric flux density time cumulated, m, bottom,single, >=0
soil macropores water sink due to exchange with matrix, NA, profile,single, none
soil macropores water volumetric content, m3.m-3, profile,single, >=0
soil macropores water volumetric flux density, m.s-1, profile,single, >=0
soil macroporosity volumetric flux density minimum, m.s-1, none,single, >=0
soil matrix macropores water exchange rate, m3.m-3.s-1, profile,single, >=0

process: root solutes uptake

description: To model solute uptake by roots in the soil profile.

category: biological processes

inputs: (name, unit, location, [vector], [constraint])

crop maximum solutes uptake mass flux density, kg.m-2.s-1, none,tagged_array, >=0
crop maximum solutes uptake molar flux density, mol.m-2.s-1, none,tagged_array
crop root length, m, none,single
crop root length density, m.m-3, profile,single
root water volumetric uptake rate, m3.m-3.s-1, profile,single
soil immobile water volumetric content, m3.m-3, profile,single
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil mobile water volumetric content, m3.m-3, profile,single
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil water volumetric content, m3.m-3, profile,single
vegetation type, NA, none,single, >0

outputs: (name, unit, location, [vector], [constraint])

crop root solutes mass uptake rate, kg.m-3.s-1, profile,tagged_array, >=0
crop root solutes mass uptake rate profile cumulated, kg.m-2.s-1, none,tagged_array, >=0
crop root solutes mass uptake rate profile cumulated daily, kg.m-2, none,tagged_array, >=0
crop root solutes mass uptake rate profile time cumulated, kg.m-2, none,tagged_array, >=0
crop root solutes molar uptake rate, mol.m-3.s-1, profile,tagged_array, >=0
crop root solutes molar uptake rate daily cumulated, mol.m-3, profile,tagged_array, >=0
crop root solutes molar uptake rate profile cumulated, mol.m-2.s-1, none,tagged_array, >=0
crop root solutes molar uptake rate profile cumulated daily, mol.m-2, none,tagged_array, >=0
crop root solutes molar uptake rate profile time cumulated, mol.m-2, none,tagged_array, >=0
soil root solutes molar uptake rate, mol.m-3.s-1, profile,tagged_array

process: root water uptake

description: To model water uptake by roots in the soil profile.

category: biological processes

inputs: (name, unit, location, [vector], [constraint])

atmosphere air pressure, Pa, surface,single
atmosphere air specific humidity, kg.kg-1, none,single, >=0
atmosphere air temperature, K, none,single, >=0
atmosphere incident longwave radiation energy flux density, W.m-2, none,single
atmosphere incident shortwave radiation energy flux density, W.m-2, none,single
atmosphere wind velocity, m.s-1, none,single
crop canopy height, m, none,single
crop green leaf area index, m2.m-2, none,single
crop leaf area index, m2.m-2, none,single
crop maximum transpiration volumetric flux density, m3.m-2.s-1, none,single
crop root density normalized, ratio0-1, profile,single, ratio0-1
crop root length, m, none,single
crop root length density, m.m-3, profile,single
crop root length density cell, m.m-3, profile,single
soil hydraulic, NA, none,single
soil water matrix potential, m(H2O), profile,single
soil water matrix potential cell, m(H2O), profile,single
soil water osmotic potential, m, profile,single, none
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

crop root water potential, m, none,single, none
crop transpiration volumetric flux density, m3.m-2.s-1, none,single
crop transpiration volumetric flux density daily, m3.m-2, none,single, none
crop transpiration volumetric flux density deficit, m.s-1, none,single, none
crop transpiration volumetric flux density deficit time cumulated, m3.m-2, none,single, none
crop transpiration volumetric flux density time cumulated, m, none,single, none
leaf water pressure, m(H2O), none,single
root water volumetric uptake rate, m3.m-3.s-1, profile,single
root water volumetric uptake rate cell, m3.m-3.s-1, profile,single
root water volumetric uptake rate time cumulated, m3.m-2, profile,single, none

process: slash and burn

description: To mimic the consequences of a slash and burn human activity.

category: external factors

inputs: none

outputs: (name, unit, location, [vector], [constraint])

mulch with soil contact organic matter pools C14labelled mass change due to slash, kg.m-2, none,tagged_array, >=0
mulch with soil contact organic matter pools weight change due to slash and burn, kg.m-2, none,tagged_array, >=0
soil organic matter pools C14labelled mass change due to slash and burn, kg.m-2, profile,tagged_array, >=0
soil organic matter pools mass change due to slash and burn, kg.m-2, profile,tagged_array, >=0

process: soil deposition

description: Describes the deposition of soil on top of the profile. Describes also changes in soil properties due to this addition.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

atmosphere air temperature daily average, K, none,single, >=0
crop root length density, m.m-3, profile,single
soil bulk density, kg.m-3, profile,single, >=0
soil cec, mol+.kg-1, profile,tagged_array, >=0
soil clay exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil electrical conductivity, S.m-1, profile,single, none
soil exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil gas molar concentration, mol.m-3, profile,tagged_array, >=0
soil grain size class number per layer, number.m-2, profile,tagged_array, >=0
soil minerals mass ratio, kg.kg-1, profile,tagged_array, >=0
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil organic carbon exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil organic matter biomass pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter dpm pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter humus pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter inert pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter pools C14labelled mass, kg.m-2, profile,tagged_array, >=0
soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil organic matter rpm pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil particles mass percentage, %, profile,tagged_array, >=0
soil pore volume per volume, m3.m-3, profile,single
soil solution pH, -, profile,single, >=0
soil temperature, K, profile,single, >=0
soil water accumulated deficit, m, profile,single,
soil water volumetric content, m3.m-3, profile,single
soil weathering pools charge concentration, mol+.kg-1, profile,tagged_array, >=0

outputs: (name, unit, location, [vector], [constraint])

soil deposited thickness, m, surface,single, >=0
soil organic matter pools C14labelled mass ratio change due to deposition, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools change due to deposition, kg.kg-1, profile,tagged_array, >=0

process: soil hydraulic properties

description: To model changes in soil hydrodynamic properties (retention curve, hydraulic conductivity).

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

rain intensity, m.s-1, none,single
soil bioturbation depth, m, none,single, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil clay mass percentage, %, profile,single, >=0
soil organic carbon mass percentage, %, profile,single, >=0
soil saturated hydraulic conductivity change due to tillage, m.s-1, layer,single, none
soil silt mass percentage, %, profile,single, >=0
soil solid bulk density, kg.m-3, profile,single, >=0

outputs: (name, unit, location, [vector], [constraint])

soil air entry parameter Campbell, m, profile,single, none
soil air entry value parameter, m-1, profile,single, none
soil capillary capacity, m-1, profile,single, none
soil hydraulic, NA, none,single
soil hydraulic conductivity, m.s-1, profile,single, none
soil hydraulic conductivity internodal, m.s-1, profile,single, none
soil residual water volumetric content, m3.m-3, profile,single, none
soil saturated hydraulic conductivity, m.s-1, profile,single, >0
soil saturated water volumetric content, m3.m-3, profile,single, >0
soil water retention curve exponent, NA, profile,single, none
soil water retention curve exponent Campbell, NA, profile,single, none

process: soil pesticides fate

description: To model pesticides degradation and pesticides exchange between aqueous and solid phases in the soil. Transport and balance are handled within the solute transport process. Volatilisation towards the atmosphere is accounted in the "crop pesticides fate" process.

category: biological processes

inputs: (name, unit, location, [vector], [constraint])

soil bulk density, kg.m-3, profile,single, >=0
soil fast sites sorbed pesticides mass concentration, kg.kg-1, profile,tagged_array, >=0
soil hydraulic, NA, none,single
soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil slow sites sorbed pesticides mass concentration, kg.kg-1, profile,tagged_array, >=0
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil temperature, K, profile,single, >=0
soil water matrix potential, m(H2O), profile,single
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil fast sites sorbed pesticides desorption rate, kg.kg-1.s-1, profile,tagged_array
soil fast sites sorbed pesticides sorption rate, kg.kg-1.s-1, profile,tagged_array
soil slow sites sorbed pesticides desorption rate, kg.kg-1.s-1, profile,tagged_array
soil slow sites sorbed pesticides sorption rate, kg.kg-1.s-1, profile,tagged_array
soil solution pesticides degradation rate, kg.m-3.s-1, profile,tagged_array, >=0
soil solution pesticides sink, kg.m-3.s-1, profile,tagged_array
soil solution pesticides source, kg.m-3.s-1, profile,tagged_array

process: soil tillage practices

description: Describes the impacts on various variables of the mixing of the soil top layer due to different tillage/ploughing practices.

category: evolution of soil properties

inputs: (name, unit, location, [vector], [constraint])

mulch organic matter biomass pool associated elements quantities, mol.m-2, none,tagged_array, >=0
mulch organic matter dpm pool associated elements quantities, mol.m-2, none,tagged_array, >=0
mulch organic matter humus pool associated elements quantities, mol.m-2, none,tagged_array, >=0
mulch organic matter inert pool associated elements quantities, mol.m-2, none,tagged_array, >=0
mulch organic matter rpm pool associated elements quantities, mol.m-2, none,tagged_array, >=0
mulch with soil contact organic matter pools C14labelled mass, kg.m-2, surface,tagged_array, >=0
mulch with soil contact organic matter pools weight, kg.m-2, surface,tagged_array, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil cec, mol+.kg-1, profile,tagged_array, >=0
soil clay exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil gibbsite moles per unit mass, mol.kg-1, profile,single, >=0
soil grain size class number per layer, number.m-2, profile,tagged_array, >=0
soil minerals mass ratio, kg.kg-1, profile,tagged_array, >=0
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil organic carbon exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil organic carbon mass, kg.m-2, profile,single, >=0
soil organic carbon volumetric percentage, %, profile,single, >=0
soil organic matter biomass pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter dpm pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter humus pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter inert pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil organic matter pools C14labelled mass, kg.m-2, profile,tagged_array, >=0
soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools mass in compartment, kg.m-2, profile,tagged_array, >=0
soil organic matter rpm pool associated elements concentration, mol.m-3, profile,tagged_array, >=0
soil particles surfacic mass, kg.m-2, profile,tagged_array, >=0
soil pore volume per volume, m3.m-3, profile,single
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single
soil weathering pools charge concentration, mol+.kg-1, profile,tagged_array, >=0
vegetation type, NA, none,single, >0

outputs: (name, unit, location, [vector], [constraint])

mulch organic matter biomass pool associated elements concentration change due to plowing, mol.kg-1, surface,tagged_array, >=0
mulch organic matter dpm pool associated elements concentration change due to plowing, mol.kg-1, surface,tagged_array, >=0
mulch organic matter humus pool associated elements concentration change due to plowing, mol.kg-1, surface,tagged_array, >=0
mulch organic matter inert pool associated elements concentration change due to plowing, mol.kg-1, surface,tagged_array, >=0
mulch organic matter rpm pool associated elements concentration change due to plowing, mol.kg-1, surface,tagged_array, >=0
mulch with soil contact organic matter pools C14labelled mass change due to plowing, kg.m-2, none,tagged_array, >=0
mulch with soil contact organic matter pools weight change due to plowing, kg.m-2, none,tagged_array, >=0
soil cec change due to plowing, mol+.kg-1, profile,tagged_array
soil clay exchangeable cations charge concentration change due to plowing, mol+.kg-1, profile,tagged_array, >=0
soil exchangeable cations charge concentration change due to plowing, mol+.kg-1, profile,tagged_array, >=0
soil gibbsite moles per unit mass change due to plowing, mol.kg-1, profile,single, >=0
soil grain size class number per layer change due to plowing, number.m-2, profile,tagged_array, >=0
soil minerals mass ratio change due to plowing, kg.kg-1, profile,tagged_array, >=0
soil mobile solution concentration change due to plowing, kg.m-3, profile,tagged_array, >=0
soil organic carbon exchangeable cations charge concentration change due to plowing, mol+.kg-1, profile,tagged_array, >=0
soil organic carbon mass change due to plowing, kg.m-2, profile,single, >=0
soil organic matter biomass pool associated elements concentration change due to plowing, mol.m-3, profile,tagged_array, >=0
soil organic matter dpm pool associated elements concentration change due to plowing, mol.m-3, profile,tagged_array, >=0
soil organic matter humus pool associated elements concentration change due to plowing, mol.m-3, profile,tagged_array, >=0
soil organic matter inert pool associated elements concentration change due to plowing, mol.m-3, profile,tagged_array, >=0
soil organic matter pools C14labelled mass change due to plowing, kg.m-2, profile,tagged_array, >=0
soil organic matter pools mass change due to plowing, kg.m-2, profile,tagged_array, >=0
soil organic matter rpm pool associated elements concentration change due to plowing, mol.m-3, profile,tagged_array, >=0
soil particles mass change due to plowing, kg.m-2, profile,tagged_array, >=0
soil temperature change due to plowing, K, profile,single, >=0
soil tillage depth, m, surface,single
soil water content change due to plowing, m3.m-3, profile,single, none
soil weathering pools charge concentration change due to plowing, mol+.kg-1, profile,tagged_array, >=0

process: solid mineral balance

description: The process responsible for the mass balance of the solid minerals.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

soil cec change due to bioturbation, mol+.kg-1, profile,tagged_array
soil cec change due to plowing, mol+.kg-1, profile,tagged_array
soil clay exchangeable cations charge concentration change due to bioturbation, mol+.kg-1, profile,tagged_array
soil clay exchangeable cations charge concentration change due to plowing, mol+.kg-1, profile,tagged_array, >=0
soil clay exchangeable cations charges amount filtering rate, mol+.m-3.s-1, profile,tagged_array, >=0
soil clay exchangeable cations release rate due to chemical dispersion, mol+.m-3.s-1, profile,tagged_array, none
soil clay exchangeable cations release rate due to splash, mol+.m-2.s-1, surface,tagged_array, none
soil clay in solution filtering rate, kg.m-3.s-1, profile,single, none
soil clay in solution mass concentration, kg.m-3, profile,single, >=0
soil deposited thickness, m, surface,single, >=0
soil eroded thickness, m, surface,single, >=0
soil exchangeable cations charge concentration change due to bioturbation, mol+.kg-1, profile,tagged_array
soil exchangeable cations charge concentration change due to geochemistry, mol+.kg-1, profile,tagged_array, >=0
soil exchangeable cations charge concentration change due to plowing, mol+.kg-1, profile,tagged_array, >=0
soil gibbsite moles per compartment change due to bioturbation, mol.m-2, profile,single, >=0
soil gibbsite moles per unit mass change due to bioturbation, mol.kg-1, profile,single, >=0
soil gibbsite moles per unit mass change due to geochemistry, mol.kg-1, profile,single, >=0
soil gibbsite moles per unit mass change due to plowing, mol.kg-1, profile,single, >=0
soil gibbsite moles per unit mass rate of change due to chemical weathering, mol.kg-1.s-1, profile,single, none
soil grain size class number per layer change due to bioturbation, number.m-2, profile,tagged_array
soil grain size class number per layer change due to chemical dispersion, number.m-2, profile,tagged_array, >=0
soil grain size class number per layer change due to physical weathering, number.m-2, profile,tagged_array, >=0
soil grain size class number per layer change due to plowing, number.m-2, profile,tagged_array, >=0
soil minerals mass ratio change due to bioturbation, kg.kg-1, profile,tagged_array
soil minerals mass ratio change due to geochemistry, kg.kg-1, profile,tagged_array, >=0
soil minerals mass ratio change due to plowing, kg.kg-1, profile,tagged_array, >=0
soil organic carbon exchangeable cations charge concentration change due to bioturbation, mol+.kg-1, profile,tagged_array, >=0
soil organic carbon exchangeable cations charge concentration change due to plowing, mol+.kg-1, profile,tagged_array, >=0
soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil organic matter pools mass in compartment, kg.m-2, profile,tagged_array, >=0
soil particles mass change due to bioturbation, kg.m-2, profile,tagged_array
soil particles mass change due to chemical dispersion, kg.m-2, profile,tagged_array, >=0
soil particles mass change due to plowing, kg.m-2, profile,tagged_array, >=0
soil solution clay exchangeable cations charge concentration, mol+.m-3, profile,tagged_array, >=0
soil surface clay splash dispersion rate, kg.m-2.s-1, surface,single, >=0
soil tillage depth, m, surface,single
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil aggregates size class proportion, ratio0-1, profile,tagged_array, ratio0-1
soil aggregates sizes, m, none,tagged_array
soil bulk density, kg.m-3, profile,single, >=0
soil cec, mol+.kg-1, profile,tagged_array, >=0
soil clay exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil clay mass percentage, %, profile,single, >=0
soil clay minerals mass percentage, %, profile,tagged_array, >=0
soil clay volumetric percentage, %, profile,single, >=0
soil exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil exchangeable cations charge concentration profile cumulated, mol+.m-2, none,tagged_array, >=0
soil gibbsite moles per compartment, mol.m-2, profile,single, >=0
soil gibbsite moles per compartment profile cumulated, mol.m-2, none,single, >=0
soil gibbsite moles per unit mass, mol.kg-1, profile,single, >=0
soil grain size class mass per layer, kg.m-2, profile,tagged_array, >=0
soil grain size class number per layer, number.m-2, profile,tagged_array, >=0
soil minerals mass, kg.m-2, profile,tagged_array, >=0
soil minerals mass profile cumulated, kg.m-2, none,tagged_array, >=0
soil minerals mass ratio, kg.kg-1, profile,tagged_array, >=0
soil organic carbon exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil organic carbon mass, kg.m-2, profile,single, >=0
soil organic carbon mass percentage, %, profile,single, >=0
soil organic carbon mass ratio, kg.kg-1, profile,single, >=0
soil organic carbon volumetric percentage, %, profile,single, >=0
soil particles mass percentage, %, profile,tagged_array, >=0
soil particles mass profile cumulated, kg.m-2, none,tagged_array, >=0
soil particles surfacic mass, kg.m-2, profile,tagged_array, >=0
soil particles volumetric percentage, %, profile,tagged_array, >=0
soil pore volume per volume, m3.m-3, profile,single
soil sand mass percentage, %, profile,single, >=0
soil silt mass percentage, %, profile,single, >=0
soil solid bulk density, kg.m-3, profile,single, >=0
soil structural pore volume per volume, m3.m-3, profile,single
soil textural pore volume per volume, m3.m-3, profile,single

process: sorption

description: Sorption of molecules on soil solide phase.

category: geochemical processes

inputs: (name, unit, location, [vector], [constraint])

soil bulk density, kg.m-3, profile,single, >=0
soil immobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil immobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil immobile solution solutes sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil immobile solution sorbed solutes molar concentration, mol.kg-1, profile,tagged_array, >=0
soil immobile water volumetric content, m3.m-3, profile,single
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil mobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil mobile solution solutes sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil mobile solution sorbed solutes molar concentration, mol.kg-1, profile,tagged_array, >=0
soil mobile water volumetric content, m3.m-3, profile,single
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil immobile solution solutes desorption rate, mol.m-3.s-1, profile,tagged_array, >=0
soil immobile solution solutes sorption rate, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution solutes desorption rate, mol.m-3.s-1, profile,tagged_array, >=0
soil mobile solution solutes sorption rate, mol.m-3.s-1, profile,tagged_array, none
soil solution solutes kinetic sites exchange rate, kg.m-3.s-1, profile,tagged_array, none
soil solution solutes kinetic sites exchange rate time cumulated, kg.m-3, profile,tagged_array, >=0
soil solution solutes kinetic sites sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil solution solutes kinetic sites sorbed concentration profile cumulated, kg.m-2, none,tagged_array, >=0

process: splash

description: Effect of rain drops on soil particle release.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

mulch with soil contact organic matter pools weight, kg.m-2, surface,tagged_array, >=0
mulch with soil contact thickness, m, surface,single, none
rain intensity, m.s-1, none,single
soil bioturbated mass fraction yearly, kg.kg-1, none,single, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil cec, mol+.kg-1, profile,tagged_array, >=0
soil clay exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil clay volumetric percentage, %, profile,single, >=0
soil exchangeable cations charge concentration, mol+.kg-1, profile,tagged_array, >=0
soil grain size class number per layer, number.m-2, profile,tagged_array, >=0
soil hydraulic, NA, none,single
soil organic carbon mass ratio, kg.kg-1, profile,single, >=0
soil particles mass percentage, %, profile,tagged_array, >=0
soil particles surfacic mass, kg.m-2, profile,tagged_array, >=0
soil surface covered fraction, m2.m-2, surface,single, ratio0-1
soil water volumetric flux density, m3.m-2.s-1, profile,single
vegetation type, NA, none,single, >0

outputs: (name, unit, location, [vector], [constraint])

soil clay exchangeable cations release rate due to splash, mol+.m-2.s-1, surface,tagged_array, none
soil clay exchangeable cations release rate due to splash time cumulated, mol.m-2, none,tagged_array, >=0
soil clay exchangeable cations release rate due to splash yearly, mol.m-2, none,tagged_array, >=0
soil clay mass replenishment for splash, kg.m-2.s-1, none,single, none
soil clay mass replenishment for splash time cumulated, kg.m-2, none,single, >=0
soil clay mass replenishment for splash yearly, kg.m-2, none,single, >=0
soil grain size class number per layer change due to splash, number.m-2, surface,tagged_array, >=0
soil surface clay detachable pool, kg.m-2, surface,single, >=0
soil surface clay splash dispersion rate, kg.m-2.s-1, surface,single, >=0
soil surface clay splash dispersion rate time cumulated, kg.m-2, surface,single, >=0
soil surface clay splash dispersion rate yearly, kg.m-2, surface,single, >=0

process: sprinkling irrigations

description: To provide schedules and amounts and concentrations for the sprinkling irrigations.

category: external factors

inputs: none

outputs: (name, unit, location, [vector], [constraint])

soil applied colloids weight, kg.m-2, none,tagged_array, >=0
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation rate time cumulated, m3.m-2, surface,single, none
soil surface sprinkling irrigation solutes mass concentration, kg.m-3, surface,tagged_array, >=0
soil surface sprinkling irrigation solutes mass concentration time cumulated, kg.m-2, surface,tagged_array, >=0
soil surface sprinkling irrigation solutes molar concentration, mol.m-3, surface,tagged_array
soil surface sprinkling irrigation solutes molar concentration time cumulated, mol.m-2, surface,tagged_array, >=0
sprinkling irrigation colloids mass concentration, kg.m-3, none,tagged_array, >=0

process: surface boundary heat flux

description: To provide a prescribed surface heat flux.

category: external factors

inputs: none

outputs: (name, unit, location, [vector], [constraint])

soil surface conductive heat energy flux density, W.m-2, surface,single

process: surface boundary pressure head

description: To provide a surface pressure head as a function of time.

category: external factors

inputs: none

outputs: (name, unit, location, [vector], [constraint])

soil surface water pressure head, m(H2O), surface,single
soil surface water volumetric content, m3.m-3, surface,single, >=0

process: surface boundary temperature

description: To provide a prescribed surface temperature as a function of time.

category: external factors

inputs: none

outputs: (name, unit, location, [vector], [constraint])

soil surface temperature, K, surface,single, >=0

process: surface energy balance

description: To model energy balance at the soil surface.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

air water vapour pressure, Pa, surface,single
atmosphere air pressure, Pa, surface,single
atmosphere air specific humidity, kg.kg-1, none,single, >=0
atmosphere air temperature, K, none,single, >=0
atmosphere air temperature daily amplitude, K, none,single, >=0
atmosphere air temperature daily average, K, none,single, >=0
atmosphere air temperature daily maximum, K, none,single, >=0
atmosphere air temperature daily minimum, K, none,single, >=0
atmosphere incident longwave radiation energy flux density, W.m-2, none,single
atmosphere incident shortwave radiation energy flux daily cumulated, J.m-2, surface,single
atmosphere incident shortwave radiation energy flux density, W.m-2, none,single
atmosphere wind velocity, m.s-1, none,single
crop canopy height, m, none,single
crop cultural coefficient, NA, none,single, none
crop green leaf area index, m2.m-2, none,single
crop leaf area index, m2.m-2, none,single
crop maximum evapotranspiration volumetric flux density Penman, m3.m-2.s-1, none,single
crop transpiration volumetric flux density, m3.m-2.s-1, none,single
crop transpiration volumetric flux density daily, m3.m-2, none,single, none
leaf water pressure, m(H2O), none,single
mulch evaporation volumetric flux density daily, kg, surface,single, >=0
mulch with soil contact evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch with soil contact maximum evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch without soil contact evaporation volumetric flux density, m3.m-2.s-1, surface,single
mulch without soil contact maximum evaporation volumetric flux density, m3.m-2.s-1, surface,single
rain intensity, m.s-1, none,single
soil surface covered fraction, m2.m-2, surface,single, ratio0-1
soil surface evaporation volumetric flux density, m3.m-2.s-1, surface,single
soil surface evaporation volumetric flux density daily, m, surface,single, none
soil surface maximum evaporation volumetric flux density, m3.m-2.s-1, surface,single
soil temperature, K, profile,single, >=0
soil water matrix potential, m(H2O), profile,single
soil water volumetric content, m3.m-3, profile,single
vegetation cover water height, m3.m-2, surface,single

outputs: (name, unit, location, [vector], [constraint])

below vegetation maximum evaporation volumetric flux density, m3.m-2.s-1, surface,single
below vegetation maximum evaporation volumetric flux density time cumulated, m3.m-2, surface,single, none
crop canopy aerodynamic resistance, s.m-1, surface,single
crop leaf temperature, K, none,single, >=0
crop maximum transpiration volumetric flux density, m3.m-2.s-1, none,single
crop maximum transpiration volumetric flux density increased, m3.m-2.s-1, none,single, none
crop maximum transpiration volumetric flux density increased time cumulated, m3.m-2, none,single, none
crop maximum transpiration volumetric flux density time cumulated, m3.m-2, none,single, >=0
crop temperature, K, surface,single, >=0
soil sensible heat energy flux density, W.m-2, surface,single
soil surface conductive heat energy flux density, W.m-2, surface,single
soil surface temperature, K, surface,single, >=0
soil surface temperature daily average, K, surface,single, >=0
vegetation cover evaporation volumetric flux density, m3.m-2.s-1, surface,single
vegetation cover leaf specific humidity, kg.kg-1, none,single, >=0

process: transport in liquid phase

description: To account for transport of disolved species.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

crop maximum solutes uptake molar flux density, mol.m-2.s-1, none,tagged_array
crop root solutes mass uptake rate, kg.m-3.s-1, profile,tagged_array, >=0
crop root solutes molar uptake rate, mol.m-3.s-1, profile,tagged_array, >=0
mulch no contact leachate solutes molar concentration, mol.m-3, surface,tagged_array
mulch with soil contact decomposition solutes sink, kg.m-3.s-1, profile,tagged_array, none
mulch with soil contact decomposition solutes source, kg.m-3.s-1, profile,tagged_array, none
mulch with soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
mulch without soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
rain intensity, m.s-1, none,single
rain solutes mass concentration, kg.m-3, surface,tagged_array, >=0
rain solutes molar concentration, mol.m-3, surface,tagged_array
soil aggregates size class proportion, ratio0-1, profile,tagged_array, ratio0-1
soil aggregates sizes, m, none,tagged_array
soil bottom solution solutes concentration, kg.m-3, bottom,tagged_array, >=0
soil bottom solution solutes molar concentration, mol.m-3, bottom,tagged_array
soil bulk density, kg.m-3, profile,single, >=0
soil fast sites sorbed pesticides desorption rate, kg.kg-1.s-1, profile,tagged_array
soil fast sites sorbed pesticides sorption rate, kg.kg-1.s-1, profile,tagged_array
soil gas molar concentration, mol.m-3, profile,tagged_array, >=0
soil hydraulic, NA, none,single
soil immobile solution hydrolysis rate, mol.m-3.s-1, profile,tagged_array, >=0
soil immobile solution solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil immobile solution solutes desorption rate, mol.m-3.s-1, profile,tagged_array, >=0
soil immobile solution solutes molar complexation rate, mol.m-3.s-1, profile,tagged_array, none
soil immobile solution solutes sorption rate, mol.m-3.s-1, profile,tagged_array, none
soil immobile solution sorbed solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil immobile water volumetric content, m3.m-3, profile,single
soil mineral fertilization surfacic mass, kg.m-2, surface,tagged_array, >=0
soil mobile solution concentration change due to bioturbation, kg.m-3, profile,tagged_array
soil mobile solution concentration change due to chemical weathering, mol.m-3, profile,tagged_array, >=0
soil mobile solution concentration change due to geochemistry, mol.m-3, profile,tagged_array, >=0
soil mobile solution concentration change due to plowing, kg.m-3, profile,tagged_array, >=0
soil mobile solution hydrolysis rate, mol.m-3.s-1, profile,tagged_array, >=0
soil mobile solution organic pollutant sink, mol.m-3.s-1, profile,tagged_array, >=0
soil mobile solution organic pollutant source, mol.m-3.s-1, profile,tagged_array
soil mobile solution rate of concentration change due to chemical weathering, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution sink source rate due to aqueous gaseous exchanges, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution solutes desorption rate, mol.m-3.s-1, profile,tagged_array, >=0
soil mobile solution solutes molar complexation rate, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution solutes molar sink due to geochemistry, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution solutes molar source due to geochemistry, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution solutes sorption rate, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution sorbed solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil mobile water volumetric content, m3.m-3, profile,single
soil mulch contact leachate solutes molar concentration, mol.m-3, surface,tagged_array
soil organic matter solutes consumption rate, mol.m-3.s-1, profile,tagged_array, none
soil organic matter solutes production rate, mol.m-3.s-1, profile,tagged_array, none
soil pah compost to mobile solution exchange rate, kg.m-3.s-1, profile,tagged_array
soil pah compost to solution exchange rate, kg.m-3.s-1, profile,tagged_array, none
soil pah compost to strong sorption sites exchange rate, kg.kg-1.s-1, profile,tagged_array
soil pah residues biological bound, kg.kg-1, profile,tagged_array, >=0
soil pah weak sites to strong sites exchange rate, kg.kg-1.s-1, profile,tagged_array
soil particles mass percentage, %, profile,tagged_array, >=0
soil pore volume per volume, m3.m-3, profile,single
soil root solutes molar uptake rate, mol.m-3.s-1, profile,tagged_array
soil slow sites sorbed pesticides desorption rate, kg.kg-1.s-1, profile,tagged_array
soil slow sites sorbed pesticides sorption rate, kg.kg-1.s-1, profile,tagged_array
soil solution denitrification rate, mol.m-3.s-1, profile,single
soil solution organic pollutant desorption rate, kg.m-3.s-1, profile,tagged_array, >=0
soil solution organic pollutant sorption rate, kg.m-3.s-1, profile,tagged_array, >=0
soil solution pesticides sink, kg.m-3.s-1, profile,tagged_array
soil solution pesticides source, kg.m-3.s-1, profile,tagged_array
soil solution sink source geochemistry, mol.m-3.s-1, profile,tagged_array
soil solution solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil solution solutes kinetic sites exchange rate, kg.m-3.s-1, profile,tagged_array, none
soil solution volatilization rate, mol.m-3.s-1, profile,tagged_array
soil structural pore volume per volume, m3.m-3, profile,single
soil surface evaporation volumetric flux density subtracted from rain, m3.m-2.s-1, surface,single, >=0
soil surface flooding irrigation solutes molar concentration, mol.m-3, surface,tagged_array
soil surface runoff height, m, surface,single
soil surface runoff volumetric flux density, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation solutes mass concentration, kg.m-3, surface,tagged_array, >=0
soil surface sprinkling irrigation solutes molar concentration, mol.m-3, surface,tagged_array
soil surface water volumetric flux density, m.s-1, surface,single
soil temperature, K, profile,single, >=0
soil textural pore volume per volume, m3.m-3, profile,single
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil bottom solutes mass flux, kg.m-2.s-1, bottom,tagged_array, none
soil bottom solutes mass flux daily cumulated, kg.m-2, bottom,tagged_array
soil bottom solutes mass flux time cumulated, kg.m-2, bottom,tagged_array
soil bottom solutes molar flux, mol.m-2.s-1, bottom,tagged_array, none
soil bottom solutes molar flux daily cumulated, mol.m-2, bottom,tagged_array, >=0
soil bottom solutes molar flux time cumulated, mol.m-2, bottom,tagged_array, >=0
soil bottom solution solutes molar flux, mol.m-2.s-1, bottom,tagged_array
soil fast sites sorbed pesticides mass concentration, kg.kg-1, profile,tagged_array, >=0
soil fast sites sorbed pesticides mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil immobile solution diffusion length, m, profile,tagged_array, >=0
soil immobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil immobile solution solutes mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil immobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil immobile solution solutes molar concentration profile cumulated, mol.m-2, none,tagged_array, >=0
soil immobile solution solutes sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil immobile solution solutes sorbed concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil immobile solution sorbed solutes molar concentration, mol.kg-1, profile,tagged_array, >=0
soil immobile solution sorbed solutes molar concentration profile cumulated, mol.m-2, none,tagged_array, >=0
soil immobile solution sorbed total DOC concentration, kg.kg-1, profile,single, >=0
soil immobile solution sorbed total pollutant concentration, kg.kg-1, profile,single, >=0
soil immobile solution total DOC concentration, kg.m-3, profile,single, >=0
soil immobile solution total pollutant concentration, kg.m-3, profile,single, >=0
soil mineral Nitrogen mass concentration, kg.kg-1, profile,single, >=0
soil mobile solution immobile solution solutes exchange rate, kg.m-3.s-1, profile,tagged_array, none
soil mobile solution immobile solution solutes exchange rate profile time cumulated, kg.m-2, none,tagged_array
soil mobile solution immobile solution solutes exchange rate time cumulated, kg.m-3, profile,tagged_array
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil mobile solution solutes mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil mobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil mobile solution solutes molar concentration profile cumulated, mol.m-2, none,tagged_array, >=0
soil mobile solution solutes sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil mobile solution solutes sorbed concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil mobile solution sorbed solutes molar concentration, mol.kg-1, profile,tagged_array, >=0
soil mobile solution sorbed solutes molar concentration profile cumulated, mol.m-2, none,tagged_array, >=0
soil mobile solution sorbed total DOC concentration, kg.kg-1, profile,single, >=0
soil mobile solution sorbed total pollutant concentration, kg.kg-1, profile,single, >=0
soil mobile solution total DOC concentration, kg.m-3, profile,single, >=0
soil mobile solution total pollutant concentration, kg.m-3, profile,single, >=0
soil pah strong sites sorbed concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil pah strongly sorbed, kg.kg-1, profile,tagged_array, >=0
soil pah weak sites sorbed concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil pah weakly sorbed, kg.kg-1, profile,tagged_array, >=0
soil slow sites sorbed pesticides mass concentration, kg.kg-1, profile,tagged_array, >=0
soil slow sites sorbed pesticides mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil solutes amount, kg.m-2, none,tagged_array
soil solution solutes balance terms cumulated, kg.m-2, none,tagged_array, >=0
soil solution solutes instantaneous sites sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil solution solutes instantaneous sites sorbed concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil solution solutes mass concentration profile cumulated, kg.m-2, none,tagged_array
soil solution solutes molar concentration profile cumulated, mol.m-2, none,tagged_array, >=0
soil sorbed solutes molar concentration profile cumulated, mol.m-2, none,tagged_array, >=0
soil surface solutes applied amount time cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes exchange rate, kg.m-2.s-1, surface,tagged_array, none
soil surface water layer solutes exchange rate time cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes molar concentration, mol.m-3, surface,tagged_array, >=0
soil surface water layer solutes runoff rate, kg.m-2.s-1, surface,tagged_array, >=0
soil surface water layer solutes runoff rate daily cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes runoff rate time cumulated, kg.m-2, surface,tagged_array, >=0

process: useless and testing

description: Use this only for testing purpose. For example, sandbox modules.

category: external factors

inputs: none

outputs: (name, unit, location, [vector], [constraint])

soil useless sizes vector, NA, none,tagged_array, none
useless, NA, none,single

process: volatilization

description: To model volatilization of dissolved species.

category: geochemical processes

inputs: (name, unit, location, [vector], [constraint])

atmosphere wind velocity, m.s-1, none,single
soil temperature, K, profile,single, >=0

outputs: (name, unit, location, [vector], [constraint])

soil solution volatilization rate, mol.m-3.s-1, profile,tagged_array

process: volume change

description: Calculates the change in soil volume (soil compartment tickness) due to processes such as bioturbation and tillage. For now, it uses Alexander PTF to calculate bulk density and then to calculate the change in volume by RHO_alex=Total_Mass/Volume.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

soil bulk density, kg.m-3, profile,single, >=0
soil organic carbon mass, kg.m-2, profile,single, >=0
soil organic carbon mass percentage, %, profile,single, >=0
soil particles surfacic mass, kg.m-2, profile,tagged_array, >=0

outputs: (name, unit, location, [vector], [constraint])

soil bulk density Alexander, kg.m-3, profile,single, >=0
soil depth Alexander, m, none,single, none

process: water flow and balance

description: Account for water flow and water balance in the soil profile.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

air water vapour pressure, Pa, surface,single
atmosphere air temperature, K, none,single, >=0
atmosphere incident shortwave radiation energy flux daily cumulated, J.m-2, surface,single
atmosphere wind velocity, m.s-1, none,single
crop root front depth, m, none,single, >=0
crop transpiration volumetric flux density, m3.m-2.s-1, none,single
root water volumetric uptake rate, m3.m-3.s-1, profile,single
root water volumetric uptake rate cell, m3.m-3.s-1, profile,single
soil bottom macropores water volumetric flux density time cumulated, m, bottom,single, >=0
soil bottom water pressure head, m(H2O), bottom,single
soil bottom water volumetric content, m3.m-3, bottom,single
soil bottom water volumetric flux density, m.s-1, bottom,single
soil hydraulic, NA, none,single
soil macropores water volumetric flux density, m.s-1, profile,single, >=0
soil matrix macropores water exchange rate, m3.m-3.s-1, profile,single, >=0
soil mulch water volumetric flux density, m.s-1, surface,single
soil pore volume per volume, m3.m-3, profile,single
soil saturated water volumetric content, m3.m-3, profile,single, >0
soil surface flooding irrigation water height, m, surface,single
soil surface maximum evaporation volumetric flux density, m3.m-2.s-1, surface,single
soil surface runoff height, m, surface,single
soil surface runoff surface fraction, m2.m-2, surface,single, ratio0-1
soil surface water pressure head, m(H2O), surface,single
soil surface water volumetric content, m3.m-3, surface,single, >=0
soil surface water volumetric flux density, m.s-1, surface,single
soil temperature, K, profile,single, >=0
soil textural pore volume per volume, m3.m-3, profile,single
soil water content change due to bioturbation, m3.m-3, profile,single, none
soil water content change due to plowing, m3.m-3, profile,single, none

outputs: (name, unit, location, [vector], [constraint])

root water volumetric uptake rate yearly, m3.m-2, none,single, none
soil air maximum volumetric content, m3.m-3, profile,single, >0
soil air volumetric content, m3.m-3, profile,single, none
soil bottom water capillary flux time cumulated, m, bottom,single, none
soil bottom water capillary flux yearly, m, bottom,single, none
soil bottom water volumetric flux density time cumulated, m3.m-2, bottom,single, none
soil immobile water volumetric content, m3.m-3, profile,single
soil infiltrability minimum, m.s-1, none,single
soil mobile water volumetric content, m3.m-3, profile,single
soil root zone water amount, m, none,single, none
soil saturation index, ratio0-1, profile,single, ratio0-1
soil saturation index cell, ratio0-1, profile,single, ratio0-1
soil surface evaporation to maximum evaporation ratio, ratio0-1, surface,single, ratio0-1
soil surface evaporation volumetric flux density, m3.m-2.s-1, surface,single
soil surface evaporation volumetric flux density daily, m, surface,single, none
soil surface evaporation volumetric flux density deficit, m3.m-2.s-1, surface,single, none
soil surface evaporation volumetric flux density deficit time cumulated, m3.m-2, surface,single, none
soil surface evaporation volumetric flux density subtracted from rain, m3.m-2.s-1, surface,single, >=0
soil surface evaporation volumetric flux density subtracted from rain time cumulated, m, surface,single, none
soil surface evaporation volumetric flux density time cumulated, m, surface,single, none
soil surface evaporation volumetric flux density yearly, m, surface,single, none
soil surface water infiltration rate, m.s-1, surface,single, >=0
soil surface water infiltration rate time cumulated, m, surface,single, none
soil surface water infiltration rate yearly, m, surface,single, none
soil water height, m3.m-2, none,single
soil water kirchhoff potential, m2.s-1, profile,single
soil water matrix potential, m(H2O), profile,single
soil water matrix potential cell, m(H2O), profile,single
soil water pressure head, m(H2O), profile,single, none
soil water pressure head gradient, NA, profile,single, none
soil water table depth, m, none,single, >=0
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single
soil water volumetric flux density time cumulated, m, profile,single, none

process: water runoff

description: To model water run-off at soil surface. In other words, the draining away of water from the soil surface.

category: physical processes

inputs: (name, unit, location, [vector], [constraint])

soil hydraulic, NA, none,single
soil infiltrability minimum, m.s-1, none,single
soil macropores water volumetric flux density, m.s-1, profile,single, >=0
soil macroporosity volumetric flux density minimum, m.s-1, none,single, >=0
soil surface water volumetric flux density, m.s-1, surface,single
soil water matrix potential, m(H2O), profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil surface runoff height, m, surface,single
soil surface runoff rate daily, m3.m-2, surface,single, >=0
soil surface runoff rate time cumulated, m3.m-2, surface,single, none
soil surface runoff rate yearly, m3.m-2, surface,single, >=0
soil surface runoff surface fraction, m2.m-2, surface,single, ratio0-1
soil surface runoff volumetric flux density, m3.m-2.s-1, surface,single

process: worm dynamic

description: To model population dynamics of earthworms.

category: biological processes

inputs: (name, unit, location, [vector], [constraint])

soil organic matter pools carbon mass ratio, kg.kg-1, profile,tagged_array, >=0
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil earthworm adults density, number.m-3, none,single, >=0
soil earthworm cocoons density, number.m-3, none,single, >=0
soil earthworm density, number.m-3, profile,tagged_array, >=0
soil earthworm juveniles density, number.m-3, none,single, >=0
soil earthworm subadults density, number.m-3, none,single, >=0

list of pools_install modules

generated by vsoil-processes version 1.20220811.10842 on 2022-08-11 17:39:09

module: BLAS_example_cpp

description: An example on the usage of Blas (Basic Linear Algebra Subprograms) library. See "www.netlib.org/blas/" for more information.

dimension: 1

keywords: demo, example, linear algebra

publications links:

Basic Linear Algebra Subprograms

is in no input mode

compatible with grid change

language: C++

licencing: copyright owner is INRAE under software licence Apache-2.0

process: useless and testing

inputs: none

outputs: (name, unit, location, [vector], [constraint])

useless, NA, none,single

parameters: (name, unit, description)

a, NA , "the source vector for testing vector copy"
m, NA , "the source matrix for testing matrix-vector multiplication"
x, NA , "the source vector for testing matrix-vector multiplication"

module: BLAS_example_fortran

description: An example on the usage of Blas (Basic Linear Algebra Subprograms) library. See "www.netlib.org/blas/" for more information.

dimension: 1

keywords: demo, example, linear algebra

publications links:

Basic Linear Algebra Subprograms

is in no input mode

compatible with grid change

language: Fortran

licencing: copyright owner is INRAE under software licence Apache-2.0

process: useless and testing

inputs: none

outputs: (name, unit, location, [vector], [constraint])

useless, NA, none,single

parameters: (name, unit, description)

a, NA , "the source vector for testing vector copy"

module: CDE

description: The module uses the vsoil_cde_cn routine to solve the CDE equation. Refer to the documentation of the routine to have a more complete description of inputs, outputs and parameters required. Several solute species can be simulated simultaneously. The module accepts layer dependent parameters. A linear isotherm can be used for sorbed species. This module does not accept sink or source terms. A first-order degradation rate is simulated. Solute exchange with a water layer at the surface can be simulated if needed. If runoff exists, the amount lost is calculated. To deal with sink or source terms one must use modules with names CDE_OM, CDE_OM_den, etc. The suffixes indicate the type of sink/source terms accepted. This module is more likely to be used for field situations. The module CDE_LEA has less inputs and parameters and is more adapted to laboratory experiments.

dimension: 1

keywords: convection, dispersion, solute transport, local equilibrium assumption

publications: Lafolie. F. 1991. Modeling water flow, nitrogen transport and root uptake including physical non-equilibrium and optimization of the root water potential. Fertilizer Research, 27, 215-231.

language: Fortran

licencing: copyright owner is INRAE under software licence Apache-2.0

process: transport in liquid phase

inputs: (name, unit, location, [vector], [constraint])

mulch with soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
mulch without soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
rain intensity, m.s-1, none,single
rain solutes molar concentration, mol.m-3, surface,tagged_array
soil bottom solution solutes concentration, kg.m-3, bottom,tagged_array, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil hydraulic, NA, none,single
soil mineral fertilization surfacic mass, kg.m-2, surface,tagged_array, >=0
soil particles mass percentage, %, profile,tagged_array, >=0
soil pore volume per volume, m3.m-3, profile,single
soil surface runoff height, m, surface,single
soil surface runoff volumetric flux density, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation solutes molar concentration, mol.m-3, surface,tagged_array
soil surface water volumetric flux density, m.s-1, surface,single
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil bottom solutes mass flux, kg.m-2.s-1, bottom,tagged_array, none
soil bottom solutes mass flux daily cumulated, kg.m-2, bottom,tagged_array
soil bottom solutes mass flux time cumulated, kg.m-2, bottom,tagged_array
soil solutes amount, kg.m-2, none,tagged_array
soil solution solutes instantaneous sites sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil solution solutes instantaneous sites sorbed concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil solution solutes mass concentration profile cumulated, kg.m-2, none,tagged_array
soil surface water layer solutes exchange rate, kg.m-2.s-1, surface,tagged_array, none
soil surface water layer solutes exchange rate time cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes molar concentration, mol.m-3, surface,tagged_array, >=0
soil surface water layer solutes runoff rate, kg.m-2.s-1, surface,tagged_array, >=0
soil surface water layer solutes runoff rate daily cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes runoff rate time cumulated, kg.m-2, surface,tagged_array, >=0

parameters: (name, unit, description)

consurf, NA , "Logical to impose surface concentration, otherwise a third-type boundary condition is used at soil surface"
conbot, NA , "Logical to impose bottom concentration, otherwise a free drainage condition is used."
upwind, NA , "Logical to use a upwind uncentered finite difference schema for spatial derivatives of the convective term."
upwind_corr, NA , "Logical to allow correction of numerical dispersion induced when UPWIND is TRUE"
ech_lame, NA , "To choose the mode of solute exchange between runoff water and soil water. 0: no exchange; 1: diffusion like (firts-order)"
first_order_deg, NA , "Logical to indicate if the first order degradation rate is used or not. If used, the degradation constant must not be 0."
calc_kd, NA , "If set to true, the Kd values will be calculated using the particles mass percentages and the Kd values given for the clay, silt and sand fractions. If set to false, the values of the parameter adscoef will be used."
degrad, s , "Half-life time for the first-order degradation process or for radioactive desintegration. The conresponding parameter (L )in the differential equation (dC/dt = -L C) is calculated in the module."
lambda, m , "Dispersivity coefficient. The dispersion coefficient equals the dispersivity multiplied by the velocity. Unit is m."
adscoef, m3.kg-1 , "Adsorption coefficient for a linear isotherm. One value per solute. Parameter is layer dependent. Unit is m3.kg-1"
codif, m2.s-1 , "Diffusion coefficients in pure water for the simulated species. Corrections for water content and temperature are made in the code. Unit is m2.s-1."
kdisso, s-1 , "Time constant for a first order rate modeling of solid granules dissolution at soil surface. The time constant is modified depending on soil water content. Unit is s-1."
Kd_clay, m3.kg-1 , "Kd value for the clay fraction. Expressed in m3 per kilogram of clay."
Kd_silt, m3.kg-1 , "Kd value for the silt fraction. Expressed in m3 per kilogram of silt."
Kd_sand, m3.kg-1 , "Kd value for the sand fraction. Expressed in m3 per kilogram of sand."

module: CDE_LEA

description: The module uses the vsoil_cde_cn routine to solve the CDE equation. Refer to the documentation of the routine to have a more complete description of inputs, outputs and parameters required. Several solute species can be simulated simultaneously. The module accepts layer dependent parameters. A linear isotherm can be used for sorbed species. To deal with sink or source terms one must use modules with names CDE_OM, CDE_OM_den, etc. The suffixes indicate the type of sink/source terms accepted. This module is more likely to be used for laboratory experiments. The module CDE has more parameters, requires more inputs and is more adapted to field experiments.

dimension: 1

keywords: convection, dispersion, transport, Local Equilibrium Assumption.

language: Fortran

licencing: copyright owner is INRAE under software licence Apache-2.0

process: transport in liquid phase

inputs: (name, unit, location, [vector], [constraint])

soil bottom solution solutes concentration, kg.m-3, bottom,tagged_array, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil pore volume per volume, m3.m-3, profile,single
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation solutes mass concentration, kg.m-3, surface,tagged_array, >=0
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil bottom solutes mass flux, kg.m-2.s-1, bottom,tagged_array, none
soil bottom solutes mass flux daily cumulated, kg.m-2, bottom,tagged_array
soil bottom solutes mass flux time cumulated, kg.m-2, bottom,tagged_array
soil solution solutes instantaneous sites sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil solution solutes instantaneous sites sorbed concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil solution solutes mass concentration profile cumulated, kg.m-2, none,tagged_array

parameters: (name, unit, description)

consurf, NA , "Logical to impose surface concentration, otherwise a third-type boundary condition is used at soil surface"
conbot, NA , "Logical to impose bottom concentration, otherwise a free drainage condition is used."
upwind, NA , "Logical to use a upwind uncentered finite difference schema for spatial derivatives of convective terms."
upwind_corr, NA , "Logical to allow correction of numerical dispersion induced when UPWIND is TRUE"
lambda, m , "Dispersivity coefficient. The dispersion coefficient equals the dispersivity multiplied by the velocity. Unit is m."
codif, m2.s-1 , "Diffusion coefficients in pure water for the simulated species. Corrections for water content and temperature are made in the code. Unit is m2.s-1."
kd, m3.kg-1 , "Slope of the linear sorption isotherm used to describe interactions of solute species with the solid phase. The model assumes instantaneous equilibrium between sorbed and aqueous species."

module: CDE_OM

description: The module uses the vsoil_cde_cn routine to solve the CDE equation. Refer to the documentation of the routine to have a more complete description of inputs, outputs and parameters required. Several solute species can be simulated simultaneously. The module accepts layer dependent parameters. A linear isotherm can be used for sorbed species. A first-order degradation rate is simulated. Solute exchange with a water layer at the surface can be simulated if needed. This module accept sink or source terms induced by organic matter transformations. To deal with other sink or source terms one must use modules with names CDE_OM_den, etc... If no sink source required, you can use the module CDE. The suffixes indicate the type of sink/source terms accepted.

dimension: 1

keywords: convection, dispersion, transport, local equilibrium assumption, organic matter, sink, source

language: Fortran

licencing: copyright owner is INRAE under software licence Apache-2.0

process: transport in liquid phase

inputs: (name, unit, location, [vector], [constraint])

mulch with soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
mulch without soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
rain intensity, m.s-1, none,single
rain solutes molar concentration, mol.m-3, surface,tagged_array
soil bottom solution solutes concentration, kg.m-3, bottom,tagged_array, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil hydraulic, NA, none,single
soil mineral fertilization surfacic mass, kg.m-2, surface,tagged_array, >=0
soil organic matter solutes consumption rate, mol.m-3.s-1, profile,tagged_array, none
soil organic matter solutes production rate, mol.m-3.s-1, profile,tagged_array, none
soil particles mass percentage, %, profile,tagged_array, >=0
soil pore volume per volume, m3.m-3, profile,single
soil surface runoff height, m, surface,single
soil surface runoff volumetric flux density, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation solutes molar concentration, mol.m-3, surface,tagged_array
soil surface water volumetric flux density, m.s-1, surface,single
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil bottom solutes mass flux, kg.m-2.s-1, bottom,tagged_array, none
soil bottom solutes mass flux daily cumulated, kg.m-2, bottom,tagged_array
soil bottom solutes mass flux time cumulated, kg.m-2, bottom,tagged_array
soil solutes amount, kg.m-2, none,tagged_array
soil solution solutes instantaneous sites sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil solution solutes instantaneous sites sorbed concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil solution solutes mass concentration profile cumulated, kg.m-2, none,tagged_array
soil surface water layer solutes exchange rate, kg.m-2.s-1, surface,tagged_array, none
soil surface water layer solutes exchange rate time cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes molar concentration, mol.m-3, surface,tagged_array, >=0
soil surface water layer solutes runoff rate, kg.m-2.s-1, surface,tagged_array, >=0
soil surface water layer solutes runoff rate daily cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes runoff rate time cumulated, kg.m-2, surface,tagged_array, >=0

parameters: (name, unit, description)

consurf, NA , "Logical to impose surface concentration, otherwise a third-type boundary condition is used at soil surface"
conbot, NA , "Logical to impose bottom concentration, otherwise a free drainage condition is used."
upwind, NA , "Logical to use a upwind uncentered finite difference schema for spatial derivatives of convective terms."
upwind_corr, NA , "Logical to allow correction of numerical dispersion induced when UPWIND is TRUE"
ech_lame, NA , "To choose the mode of solute exchange between runoff water and soil water. 0: no exchange; 1: diffusion like (firts-order)"
first_order_deg, NA , "Logical to indicate if the first order degradation rate is used or not. If used, the degradation constant must not be 0."
calc_kd, NA , "If set to true, the Kd values will be calculated using the particles mass percentages and the Kd values given for the clay, silt and sand fractions. If set to false, the values of the parameter adscoef will be used."
degrad, s , "Hajf-life time for the first-order degradation process or for radioactive desintegration. The conresponding parameter (L )in the differential equation (dC/dt = -L C) is calculated in the module."
lambda, m , "Dispersivity coefficient. The dispersion coefficient equals the dispersivity multiplied by the velocity. Unit is m."
adscoef, m3.kg-1 , "Adsorption coefficient for a linear isotherm. One value per solute. Parameter is layer dependent. Unit is m3.kg-1"
codif, m2.s-1 , "Diffusion coefficients in pure water for the simulated species. Corrections for water content and temperature are made in the code. Unit is m2.s-1."
kdisso, s-1 , "Time constant for a first order rate modeling of solid granules dissolution at soil surface. The time constant is modified depending on soil water content. Unit is s-1."
Kd_clay, m3.kg-1 , "Kd value for the clay fraction. Expressed in m3 per kilogram of clay."
Kd_silt, m3.kg-1 , "Kd value for the silt fraction. Expressed in m3 per kilogram of silt."
Kd_sand, m3.kg-1 , "Kd value for the sand fraction. Expressed in m3 per kilogram of sand."

module: CDE_OM_crop

description: The module uses the vsoil_cde_cn routine to solve the CDE equation. Refer to the documentation of the routine to have a more complete description of inputs, outputs and parameters required. Several solute species can be simulated simultaneously. The module accepts layer dependent parameters. A linear isotherm can be used for sorbed species. A first-order degradation rate is simulated. Solute exchange with a water layer at the surface can be simulated if needed. This module accept sink or source terms induced by organic matter transformations and by uptake by roots. To deal with other sink or source terms one must use modules with names CDE_OM_den , etc... The suffixes indicate the type of sink/source terms accepted. If no sink source required, you can use the module CDE.

dimension: 1

keywords: convection, dispersion, transport, local equilibrium assumption, organic matter, sink, source, roots uptake

language: Fortran

licencing: copyright owner is INRAE under software licence Apache-2.0

process: transport in liquid phase

inputs: (name, unit, location, [vector], [constraint])

crop root solutes mass uptake rate, kg.m-3.s-1, profile,tagged_array, >=0
mulch with soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
mulch without soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
rain intensity, m.s-1, none,single
rain solutes molar concentration, mol.m-3, surface,tagged_array
soil bottom solution solutes concentration, kg.m-3, bottom,tagged_array, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil hydraulic, NA, none,single
soil mineral fertilization surfacic mass, kg.m-2, surface,tagged_array, >=0
soil organic matter solutes consumption rate, mol.m-3.s-1, profile,tagged_array, none
soil organic matter solutes production rate, mol.m-3.s-1, profile,tagged_array, none
soil particles mass percentage, %, profile,tagged_array, >=0
soil pore volume per volume, m3.m-3, profile,single
soil surface runoff height, m, surface,single
soil surface runoff volumetric flux density, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation solutes mass concentration, kg.m-3, surface,tagged_array, >=0
soil surface water volumetric flux density, m.s-1, surface,single
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil bottom solutes mass flux, kg.m-2.s-1, bottom,tagged_array, none
soil bottom solutes mass flux daily cumulated, kg.m-2, bottom,tagged_array
soil bottom solutes mass flux time cumulated, kg.m-2, bottom,tagged_array
soil solutes amount, kg.m-2, none,tagged_array
soil solution solutes instantaneous sites sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil solution solutes instantaneous sites sorbed concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil solution solutes mass concentration profile cumulated, kg.m-2, none,tagged_array
soil surface water layer solutes exchange rate, kg.m-2.s-1, surface,tagged_array, none
soil surface water layer solutes exchange rate time cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes molar concentration, mol.m-3, surface,tagged_array, >=0
soil surface water layer solutes runoff rate, kg.m-2.s-1, surface,tagged_array, >=0
soil surface water layer solutes runoff rate daily cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes runoff rate time cumulated, kg.m-2, surface,tagged_array, >=0

parameters: (name, unit, description)

consurf, NA , "Logical to impose surface concentration, otherwise a third-type boundary condition is used at soil surface"
conbot, NA , "Logical to impose bottom concentration, otherwise a free drainage condition is used."
upwind, NA , "Logical to use a upwind uncentered finite difference schema for spatial derivatives of convective terms."
upwind_corr, NA , "Logical to allow correction of numerical dispersion induced when UPWIND is TRUE"
ech_lame, NA , "To choose the mode of solute exchange between runoff water and soil water. 0: no exchange; 1: diffusion like (firts-order)"
first_order_deg, NA , "Logical to indicate if the first order degradation rate is used or not. If used, the degradation constant must not be 0."
calc_kd, NA , "If set to true, the Kd values will be calculated using the particles mass percentages and the Kd values given for the clay, silt and sand fractions. If set to false, the values of the parameter adscoef will be used."
degrad, s , "Hajf-life time for the first-order degradation process or for radioactive desintegration. The conresponding parameter (L )in the differential equation (dC/dt = -L C) is calculated in the module."
adscoef, m3.kg-1 , "Adsorption coefficient for a linear isotherm. One value per solute. Parameter is layer dependent. Unit is m3.kg-1"
lambda, m , "Dispersivity coefficient. The dispersion coefficient equals the dispersivity multiplied by the velocity. Unit is m."
codif, m2.s-1 , "Diffusion coefficients in pure water for the simulated species. Corrections for water content and temperature are made in the code. Unit is m2.s-1."
kdisso, s-1 , "Time constant for a first order rate modeling of solid granules dissolution at soil surface. The time constant is modified depending on soil water content. Unit is s-1."
Kd_clay, m3.kg-1 , "Kd value for the clay fraction. Expressed in m3 per kilogram of clay."
Kd_silt, m3.kg-1 , "Kd value for the silt fraction. Expressed in m3 per kilogram of silt."
Kd_sand, m3.kg-1 , "Kd value for the sand fraction. Expressed in m3 per kilogram of sand."

module: CDE_PAH

description: The module uses the vsoil_cde_cn routine to solve the CDE equation. Refer to the documentation of the routine to have a more complete description of inputs, outputs and parameters required. Several solute species can be simulated simultaneously. The module accepts layer dependent parameters. This module accepts sink and source terms coming from modules simulating the sorption, desorption and degradation of organic pollutents, such as PAH for example. A source term for pollutent release provided by a module using organic matter decomposition is also available. The module manages the exchange with a water layer at the soil surface if needed. To deal with other sink or source terms one must use modules with names CDE_OM, CDE_OM_den, etc. The suffixes indicate the type of sink/source terms accepted. If no sink source required, you can use the module CDE or CDE_LEA.

dimension: 1

keywords: convection dispersion, transport, organic pollutents sink source terms, degradation

publications: F. Lafolie 2012. Résolution des équations de transport de solutés en Non-saturé. Modèle convection dispersion et modèle avec eau immobile. 21 pp. Rapport interne.

language: Fortran

licencing: copyright owner is INRAE under software licence Apache-2.0

process: transport in liquid phase

inputs: (name, unit, location, [vector], [constraint])

mulch with soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
mulch without soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
rain intensity, m.s-1, none,single
rain solutes mass concentration, kg.m-3, surface,tagged_array, >=0
soil bottom solution solutes concentration, kg.m-3, bottom,tagged_array, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil hydraulic, NA, none,single
soil pah compost to solution exchange rate, kg.m-3.s-1, profile,tagged_array, none
soil pah compost to strong sorption sites exchange rate, kg.kg-1.s-1, profile,tagged_array
soil pah weak sites to strong sites exchange rate, kg.kg-1.s-1, profile,tagged_array
soil pore volume per volume, m3.m-3, profile,single
soil solution organic pollutant desorption rate, kg.m-3.s-1, profile,tagged_array, >=0
soil solution organic pollutant sorption rate, kg.m-3.s-1, profile,tagged_array, >=0
soil solution solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil surface runoff height, m, surface,single
soil surface runoff volumetric flux density, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation solutes mass concentration, kg.m-3, surface,tagged_array, >=0
soil surface water volumetric flux density, m.s-1, surface,single
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil bottom solutes mass flux, kg.m-2.s-1, bottom,tagged_array, none
soil bottom solutes mass flux daily cumulated, kg.m-2, bottom,tagged_array
soil bottom solutes mass flux time cumulated, kg.m-2, bottom,tagged_array
soil pah strong sites sorbed concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil pah strongly sorbed, kg.kg-1, profile,tagged_array, >=0
soil pah weak sites sorbed concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil pah weakly sorbed, kg.kg-1, profile,tagged_array, >=0
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil solution solutes mass concentration profile cumulated, kg.m-2, none,tagged_array
soil surface water layer solutes exchange rate, kg.m-2.s-1, surface,tagged_array, none
soil surface water layer solutes exchange rate time cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes molar concentration, mol.m-3, surface,tagged_array, >=0
soil surface water layer solutes runoff rate, kg.m-2.s-1, surface,tagged_array, >=0
soil surface water layer solutes runoff rate daily cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes runoff rate time cumulated, kg.m-2, surface,tagged_array, >=0

parameters: (name, unit, description)

consurf, NA , "Logical to impose surface concentration, otherwise a third-type boundary condition is used at soil surface"
conbot, NA , "Logical to impose bottom concentration, otherwise a free drainage condition is used."
upwind, NA , "Logical to use a upwind uncenetered finite difference schema for spatial derivatives"
upwind_corr, NA , "Logical to allow correction of numerical dispersion induced when UPWIND is TRUE"
ech_lame, NA , "To choose the interaction between the soil water and the water layer if it is present."
lambda, m , "Dispersivity coefficient. The dispersion coefficient equals the dispersivity multiplied by the velocity."
adscoef, m3.kg-1 , "Adsorption coefficient for a linear isotherm. One value per solute."
codif, m2.s-1 , "Diffusions cofficients in pure water for the simulated species. Corrections for water content and temperature are made in the code."

module: CDE_PEST

description: The module uses the vsoil_cde_cn routine to solve the CDE equation. Refer to the documentation of the routine to have a more complete description of inputs, outputs and parameters required. Several solute species can be simulated simultaneously. The module accepts layer dependent parameters. This module accepts sink and source terms coming from modules simulating the sorption, desorption and degradation of pesticides. The module manages the exchange with a water layer at the soil surface if needed. To deal with other sink or source terms one must use modules with names CDE_OM, CDE_OM_den, etc. The suffixes indicate the type of sink/source terms accepted. If no sink source required, you can use the module CDE or CDE_LEA.

dimension: 1

keywords: convection dispersion, transport, pesticides sink source terms, degradation, sorption

user documentation: CDE_PEST.pdf

publications: F. Lafolie 2012. Résolution des équations de transport de solutés en Non-saturé. Modèle convection dispersion et modèle avec eau immobile. 21 pp. Rapport interne.

language: Fortran

licencing: copyright owner is INRAE under software licence Apache-2.0

process: transport in liquid phase

inputs: (name, unit, location, [vector], [constraint])

mulch with soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
mulch without soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
rain intensity, m.s-1, none,single
rain solutes mass concentration, kg.m-3, surface,tagged_array, >=0
soil bottom solution solutes concentration, kg.m-3, bottom,tagged_array, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil fast sites sorbed pesticides desorption rate, kg.kg-1.s-1, profile,tagged_array
soil fast sites sorbed pesticides sorption rate, kg.kg-1.s-1, profile,tagged_array
soil hydraulic, NA, none,single
soil pore volume per volume, m3.m-3, profile,single
soil slow sites sorbed pesticides desorption rate, kg.kg-1.s-1, profile,tagged_array
soil slow sites sorbed pesticides sorption rate, kg.kg-1.s-1, profile,tagged_array
soil solution pesticides sink, kg.m-3.s-1, profile,tagged_array
soil solution pesticides source, kg.m-3.s-1, profile,tagged_array
soil surface runoff height, m, surface,single
soil surface runoff volumetric flux density, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation solutes mass concentration, kg.m-3, surface,tagged_array, >=0
soil surface water volumetric flux density, m.s-1, surface,single
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil bottom solutes mass flux, kg.m-2.s-1, bottom,tagged_array, none
soil bottom solutes mass flux daily cumulated, kg.m-2, bottom,tagged_array
soil bottom solutes mass flux time cumulated, kg.m-2, bottom,tagged_array
soil fast sites sorbed pesticides mass concentration, kg.kg-1, profile,tagged_array, >=0
soil fast sites sorbed pesticides mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil slow sites sorbed pesticides mass concentration, kg.kg-1, profile,tagged_array, >=0
soil slow sites sorbed pesticides mass concentration profile cumulated, kg.m-2, none,tagged_array, >=0
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil solution solutes mass concentration profile cumulated, kg.m-2, none,tagged_array
soil surface water layer solutes exchange rate, kg.m-2.s-1, surface,tagged_array, none
soil surface water layer solutes exchange rate time cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes molar concentration, mol.m-3, surface,tagged_array, >=0
soil surface water layer solutes runoff rate, kg.m-2.s-1, surface,tagged_array, >=0
soil surface water layer solutes runoff rate daily cumulated, kg.m-2, surface,tagged_array, >=0
soil surface water layer solutes runoff rate time cumulated, kg.m-2, surface,tagged_array, >=0

parameters: (name, unit, description)

consurf, NA , "Logical to impose surface concentration, otherwise a third-type boundary condition is used at soil surface"
conbot, NA , "Logical to impose bottom concentration, otherwise a free drainage condition is used."
upwind, NA , "Logical to use a upwind uncenetered finite difference schema for spatial derivatives"
upwind_corr, NA , "Logical to allow correction of numerical dispersion induced when UPWIND is TRUE"
ech_lame, NA , "To choose the interaction between the soil water and the water layer if it is present."
lambda, m , "Dispersivity coefficient. The dispersion coefficient equals the dispersivity multiplied by the velocity."
adscoef, m3.kg-1 , "Adsorption coefficient for a linear isotherm. One value per solute."
codif, m2.s-1 , "Diffusions cofficients in pure water for the simulated species. Corrections for water content and temperature are made in the code."

module: CDE_kin_sorp

dimension: 1

keywords: convection, dispersion, transport, local equilibrium assumption, kinetic sorption

language: Fortran

licencing: copyright owner is INRAE under software licence Apache-2.0

process: transport in liquid phase

inputs: (name, unit, location, [vector], [constraint])

soil bottom solution solutes concentration, kg.m-3, bottom,tagged_array, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil mobile water volumetric content, m3.m-3, profile,single
soil pore volume per volume, m3.m-3, profile,single
soil solution solutes kinetic sites exchange rate, kg.m-3.s-1, profile,tagged_array, none
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation solutes mass concentration, kg.m-3, surface,tagged_array, >=0
soil temperature, K, profile,single, >=0
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil bottom solutes mass flux, kg.m-2.s-1, bottom,tagged_array, none
soil bottom solutes mass flux daily cumulated, kg.m-2, bottom,tagged_array
soil bottom solutes mass flux time cumulated, kg.m-2, bottom,tagged_array
soil solution solutes instantaneous sites sorbed concentration, kg.kg-1, profile,tagged_array, >=0
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil solution solutes mass concentration profile cumulated, kg.m-2, none,tagged_array

parameters: (name, unit, description)

consurf, NA , "Logical to impose surface concentration, otherwise a third-type boundary condition is used at soil surface"
conbot, NA , "Logical to impose bottom concentration, otherwise a free drainage condition is used."
upwind, NA , "Logical to use a upwind uncentered finite difference schema for spatial derivatives of convective terms."
upwind_corr, NA , "Logical to allow correction of numerical dispersion induced when UPWIND is TRUE"
lambda, m , "Dispersivity coefficient. The dispersion coefficient equals the dispersivity multiplied by the velocity. Unit is m."
codif, m2.s-1 , "Diffusion coefficients in pure water for the simulated species. Corrections for water content and temperature are made in the code. Unit is m2.s-1."
kd, m3.kg-1 , "Slope of the linear sorption isotherm used to desscribe interactions of solute species with the solid phase. The model assumes instantaneous equilibrium between sorbed and aqueous species."

module: CDE_tracer

description: The module was extracted from the PASTIS model. This version implements a numerical schema for the solution of the convection dispersion equation for a tracer (no sorption) . The module uses a Crank-Nicholson time integration schema. It offers the possibility to choose between a centered or a upwind finite differences schema for spatial derivatives discretisation. Several solute species can be simulated simultaneously. The schema in this module does not accept sink or source terms. This module is intended to be used for laboratory experiments as inputs do not consider rains. To deal with sorbing species (LEA assumption) one must use module CDE_solute. To deal with sink or source terms use modules with names CDE_solute_OM, CDE_solute_OM_crop, etc. The suffixes indicate the type of sink/source terms accepted.

dimension: 1

keywords: Convection, dispersion, transport, tracer

language: Fortran

licencing: copyright owner is INRAE under software licence Apache-2.0

process: transport in liquid phase

inputs: (name, unit, location, [vector], [constraint])

soil bottom solution solutes concentration, kg.m-3, bottom,tagged_array, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil pore volume per volume, m3.m-3, profile,single
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation solutes mass concentration, kg.m-3, surface,tagged_array, >=0
soil temperature, K, profile,single, >=0
soil water volumetric content, m3.m-3, profile,single
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil bottom solutes mass flux, kg.m-2.s-1, bottom,tagged_array, none
soil bottom solutes mass flux daily cumulated, kg.m-2, bottom,tagged_array
soil bottom solutes mass flux time cumulated, kg.m-2, bottom,tagged_array
soil solution solutes mass concentration, kg.m-3, profile,tagged_array
soil solution solutes mass concentration profile cumulated, kg.m-2, none,tagged_array

parameters: (name, unit, description)

consurf, NA , "Logical to impose surface concentration, otherwise a third-type boundary condition is used at soil surface"
conbot, NA , "Logical to impose bottom concentration, otherwise a free drainage condition is used."
upwind, NA , "Logical to use a upwind uncentered finite difference schema for spatial derivatives of convective terms."
upwind_corr, NA , "Logical to allow correction of numerical dispersion induced when UPWIND is TRUE"
lambda, m , "Dispersivity coefficient. The dispersion coefficient equals the dispersivity multiplied by the velocity. Unit is m."
codif, m2.s-1 , "Diffusion coefficients in pure water for the simulated species. Corrections for water content and temperature are made in the code. Unit is m2.s-1."

module: CD_Pastis_SGEN_fast

description: The module was extracted from the PASTIS model. This version implements a numerical schema for the solution of the convection dispersion equation. The module offers the possibility to use a fully implicit or a Crank-Nicholson time integration schema. It also offers the possibility to choose between a centered or a upwind finite differences schema for spatial derivatives discretization. Several solute species can be simulated simultaneously. The module accepts sink and source terms coming from a "organic matter" module. Accepts also sink terms coming from a root solutes uptake module. Accepts sink/source termes from a geochemistry module. Details on the numerical solution can be found in the report and articles indicated below. Simplified for SGEN by assuming that the diffusion coefficients are the same for all the species, which enables to calculate the matrix only one time for all the species. The second member only changes from one species to another.

dimension: 1

keywords: convection dispersion , local equilibrium assumption, transport, organic matter sink source terms

publications: F. Lafolie 2012. Résolution des équations de transport de solutés en Non-saturé. Modèle convection dispersion et modèle avec eau immobile. 21 pp. Rapport interne.

compatible with grid change

language: Fortran

licencing: copyright owner is INRAE under software licence Apache-2.0

process: transport in liquid phase

inputs: (name, unit, location, [vector], [constraint])

crop root solutes molar uptake rate, mol.m-3.s-1, profile,tagged_array, >=0
mulch with soil contact decomposition solutes sink, kg.m-3.s-1, profile,tagged_array, none
mulch with soil contact decomposition solutes source, kg.m-3.s-1, profile,tagged_array, none
mulch with soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
mulch without soil contact leachate mass concentration, kg.m-3, surface,tagged_array, >=0
rain intensity, m.s-1, none,single
rain solutes molar concentration, mol.m-3, surface,tagged_array
soil bottom solution solutes concentration, kg.m-3, bottom,tagged_array, >=0
soil bulk density, kg.m-3, profile,single, >=0
soil hydraulic, NA, none,single
soil mineral fertilization surfacic mass, kg.m-2, surface,tagged_array, >=0
soil mobile solution concentration change due to bioturbation, kg.m-3, profile,tagged_array
soil mobile solution concentration change due to geochemistry, mol.m-3, profile,tagged_array, >=0
soil mobile solution concentration change due to plowing, kg.m-3, profile,tagged_array, >=0
soil mobile solution rate of concentration change due to chemical weathering, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution solutes molar sink due to geochemistry, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution solutes molar source due to geochemistry, mol.m-3.s-1, profile,tagged_array, none
soil mobile water volumetric content, m3.m-3, profile,single
soil organic matter solutes consumption rate, mol.m-3.s-1, profile,tagged_array, none
soil organic matter solutes production rate, mol.m-3.s-1, profile,tagged_array, none
soil pore volume per volume, m3.m-3, profile,single
soil surface runoff height, m, surface,single
soil surface sprinkling irrigation rate, m3.m-2.s-1, surface,single
soil surface sprinkling irrigation solutes molar concentration, mol.m-3, surface,tagged_array
soil surface water volumetric flux density, m.s-1, surface,single
soil temperature, K, profile,single, >=0
soil water volumetric flux density, m3.m-2.s-1, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil bottom solutes molar flux, mol.m-2.s-1, bottom,tagged_array, none
soil bottom solutes molar flux daily cumulated, mol.m-2, bottom,tagged_array, >=0
soil bottom solutes molar flux time cumulated, mol.m-2, bottom,tagged_array, >=0
soil mobile solution solutes mass concentration, kg.m-3, profile,tagged_array, >=0
soil solution solutes mass concentration profile cumulated, kg.m-2, none,tagged_array

parameters: (name, unit, description)

Activation, NA , "Enables to activate or deactivate the module. If you choose to deactivate the module, make sure that the modules using the solute concentrations are also deactivated or not present in the model."
Identical_DIFFUSION, NA , "If set to TRUE, the module assumes that the diffusion coefficients are the same for all the species. The first in the list is used. It enables to compute the stiffness matrix only one time for all the species. Only the second member of the differential system is calculated for each species."
No_LEA, NA , "If set to TRUE the module assumes no sorption. Hence it ignores the adsorption coefficients if different from zero. The main consequence is that the retardation factor reduces to the water content and do not depend on the solute species. This option must be set to TRUE if the option "Identical_Diffusion" is set to TRUE. This option can be used when the LEA is not required. This is the case if a geochemistry module is coupled, and in all the cases for which other modules take care of the interactions of the species with the solid phase."
consurf, NA , "Logical to impose surface concentration, otherwise a third-type boundary condition is used at soil surface"
conbot, NA , "Logical to impose bottom concentration, otherwise a free drainage condition is used."
upwind, NA , "Logical to use a upwind uncenetered finite difference schema for spatial derivatives"
upwind_corr, NA , "Logical to allow correction of numerical dispersion induced when UPWIND is TRUE"
ech_lame, NA , "Logical to allow solute exchange between the soil and free water at the soil surface"
geochem_coupling, NA , "To choose the way geochemistry is couopled to transport. 0: correspond to the introduction of sink and source calculated in the geochemistry modules. These terms have units: moles /volume of soil/ time. (mol.m-3.s-1). With this option, the geochemistry module must be called before the transport module to ensure that they both use the same time increment. 1: corresponds to the modification of the concentration at the begenning of the time increment. The modification takes the actual concentration avalaible in the "valid_cmob" variable and adds the change calculated by the geochemistry module. With this option, the geochemistry module can be called before or after the transport module."
lambda, m , "Dispersivity coefficient. The dispersion coefficient equals the dispersivity multiplied by the velocity."
adscoef, m3.kg-1 , "Adsorption coefficient for a linear isotherm. One value per solute."
codif, m2.s-1 , "Diffusions cofficients in pure water for the simulated species. Corrections for water content and temperature are made in the code."
kdisso, s-1 , "Constante de temps pour la dissolution des granules de fertilisant."
nlayers, NA , "Number of soil layers in which the solute amounts will be evaluated (for output purpose)."
zlayers, m , "Depths defining the NLAYERS in which the solutes amounts will be calculated. It is assumed that the upper bound of one layer corresponds to the lower bound of the above layer. Unit is m."
delta_write, s , "Time increment between two writtings of the solute amounts in a file. Unit is s"

module: DOC_TOC_association_PolDOC

description: Calculates the sink/source terms for the soil solution resulting from the complexation in solution of 3 solute species: the pollutant (TOC), theDOC and the association of both. The sink/source term calculated is positive if it is a source for the soil solution and negative if it is a sink. This modue uses concentrations expressed in moles per unit volume. WARNING: Does not work with concentrations in mass per unit volume.

dimension: 1

keywords: DOC, TOC, complexation, kinetic, association, dissociation

language: Fortran

licencing: copyright owner is INRAE under software licence Apache-2.0

process: complexation

inputs: (name, unit, location, [vector], [constraint])

soil immobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil immobile water volumetric content, m3.m-3, profile,single
soil mobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil mobile water volumetric content, m3.m-3, profile,single

outputs: (name, unit, location, [vector], [constraint])

soil immobile solution solutes molar complexation rate, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution solutes molar complexation rate, mol.m-3.s-1, profile,tagged_array, none

parameters: (name, unit, description)

pol, NA , "Rank of pollutant in produced variables."
doc, NA , "Rank of DOC in produced variables."
poldoc, NA , "Rank of pollutant associated with DOC in produced variables."
k_as, s-1 , "Time constant for association between the pollutant and the DOC."
k_dis, s-1 , "Time constant for dissociation between the pollutant and the DOC."
k_stoechio, mol.mol-1 , "Stoechiometric coefficient for association of pollutant with DOC in solution. Means the number of moles of pollutant per mole of DOC."

module: DOC_TOC_degradation_PolDOC

description: Calculates degradation rates with a first order law. Rates are positive to comply with the transport module. Calculates hydrolisis of soil organic carbon. This module controls the time increment using the degradation time constants for mobile water, immobile water and sorption sites. The module was developed for the PolDOC model, but can be easily used as a starting point for developping a new module for degradation.

dimension: 1

keywords: degradation, first-order kinetic , hydrolisis, soil organic carbon, mobile solution, immobile solution, sorbed species.

language: Fortran

licencing: copyright owner is INRAE under software licence Apache-2.0

process: molecules degradation

inputs: (name, unit, location, [vector], [constraint])

soil bulk density, kg.m-3, profile,single, >=0
soil immobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil immobile solution sorbed solutes molar concentration, mol.kg-1, profile,tagged_array, >=0
soil immobile water volumetric content, m3.m-3, profile,single
soil mobile solution solutes molar concentration, mol.m-3, profile,tagged_array, >=0
soil mobile solution sorbed solutes molar concentration, mol.kg-1, profile,tagged_array, >=0
soil mobile water volumetric content, m3.m-3, profile,single
soil organic carbon mass ratio, kg.kg-1, profile,single, >=0

outputs: (name, unit, location, [vector], [constraint])

soil immobile solution hydrolysis rate, mol.m-3.s-1, profile,tagged_array, >=0
soil immobile solution solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil immobile solution sorbed solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution hydrolysis rate, mol.m-3.s-1, profile,tagged_array, >=0
soil mobile solution solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil mobile solution sorbed solutes degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil solution degradation rate, mol.m-3.s-1, profile,tagged_array, none
soil solution degradation rate profile cumulated, mol.m-2.s-1, none,tagged_array, none
soil solution degradation rate profile time cumulated, mol.m-2,